Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02540 ATGGCGAAAAATCCCAATTTAGATATTAAACTCCCTCCTGGATTTAGATTCTATCCATCTGATGAGGAGCTCATTGTTCACTATCTGAGAAACAAAGTGACTTCTTGTCCCCTCCCTGCTTCTTTCATAGCAGAAATTGATCTATATAAGTATAATCCATGGGAGCTTCCAAGCAAAGCTTTGTTTGGAGAGGATGAATGGTTTTTCTTTACTCCTAGGGACAGGAAGTATCCTAATGGGATGAGGCCAAACAGAGCTGCTGGTTCAGGTTATTGGAAGGCCACAGGGACTGATAAACCCATTCTCACTTGTTGTGGGATGAAGAACATTGGAGTGAAGAAAGCCCTTGTGTTCTACAAGGGACGCCCTCCAAAGGGATCTAAAACAGATTGGATCATGCATGAGTATAGGTTACTTGATTCAATGATCTTGAATTCCAAGAAAAGAGGGTCCATGCCCATGAGACTGGATGATTGGGTGCTATGCCGCGTTCGACAAAAAACTGGAAGCCCTAGAAGCTCTTGGGAAGATTCAAATGAATCTATCCATGATCCAACGGGCTACTTCCAACAAATGAATGTGAACCCTAATCCTGAACAGCTCCAAAACTCCATGCACAATGAGTTCCCACTGTTACCTTACATTCTGGCAACTCAGAATACTCTTCCTTCTGTTGCTATAGCCTCAAACATAAGCTTTCAATCATCTGTTTCATTCCAGGAAGACAACTCAAGTAAAATAGAAGCACAGGCCTTAGAATCTGTTGCTGAAAGCTTGTTTGATCCACCAAAGCGAAAAGCCATGGAAGAAAACCAGTTGGAATTTTATTTTCCTCCTTATAAGAAGGTAAGCACAGGGGAAGCTGAGAAGGATAAGATGATTGAGATAGCTTTAAGCAAGGGCTGCAATTTCAACAACTATGGTCATTGGAGTTCCATCATACAACCTCAAGAGCTGACTAATTTGCTTACTTGGCCTTTTCAGGATATATAA 993 0.4159 MAKNPNLDIKLPPGFRFYPSDEELIVHYLRNKVTSCPLPASFIAEIDLYKYNPWELPSKALFGEDEWFFFTPRDRKYPNGMRPNRAAGSGYWKATGTDKPILTCCGMKNIGVKKALVFYKGRPPKGSKTDWIMHEYRLLDSMILNSKKRGSMPMRLDDWVLCRVRQKTGSPRSSWEDSNESIHDPTGYFQQMNVNPNPEQLQNSMHNEFPLLPYILATQNTLPSVAIASNISFQSSVSFQEDNSSKIEAQALESVAESLFDPPKRKAMEENQLEFYFPPYKKVSTGEAEKDKMIEIALSKGCNFNNYGHWSSIIQPQELTNLLTWPFQDI 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02540 330 Pfam No apical meristem (NAM) protein 12 138 IPR003441 GO:0003677|GO:0006355
Bach1g02540 330 Gene3D NAC domain 20 170 IPR036093 GO:0003677|GO:0006355
Bach1g02540 330 ProSiteProfiles NAC domain profile. 11 167 IPR003441 GO:0003677|GO:0006355
Bach1g02540 330 FunFam NAC domain-containing protein 72-like 20 172 - -
Bach1g02540 330 SUPERFAMILY NAC domain 9 167 IPR036093 GO:0003677|GO:0006355
Bach1g02540 330 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 10 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02540 Bach-Chr1 36620480 36621680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02540 11 176 NAC Transcription Factor Family AT1G61110 67.241 6.64e-81 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bach1g02540 NAM 1.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02540 - - gmx:100788799 443.736