Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02539 ATGCAAATGATGCCTGGTGACCCTTTTTCGCTATCTACTTCGATCGGTGGGTTTGCTCAGTCTCAGAGTCAGGAACAAAACACAAACCCTAAAGCTAAACCTAATCCGGCTCCTACAGGCAAGAAAAAGAGAAACCTACCAGGAACACCAGATCCAGATGCCGAGGTCATTGCTCTTTCGCCGAAAACTCTCATGGCTACCAACCGATTCATTTGTGAAATATGCAACAAAGGGTTTCAGAGAGATCAGAATCTTCAACTTCACCGAAGGGGACACAACCTTCCATGGAAGCTACGGCAAAGGTCCAACAAAGAGGTTATCAGAAAGAAGGTTTACATCTGCCCGGAGAAGACTTGCGTCCACCATGATCCGGCAAGAGCACTTGGCGACCTCACCGGAATAAAGAAGCATTTCAGCCGCAAACATGGTGAGAAGAAGTGGAAGTGTGACAAGTGTTCCAAGAAATATGCTGTCCAATCTGACTGGAAAGCTCACACCAAAACTTGTGGAACTAGGGAATATAAGTGTGACTGTGGCACCCTCTTCTCCAGGAAGGACAGCTTCATTACCCACAGAGCTTTCTGTGATGCCTTAGCTGAAGAGAGTGCCAGGCTCACCTCAGTTGCATCAACGAACCTAAATTTCAAGAACGAAGATGTGATCAATTCACAGCCTAGTTTGGGGCATGGATTTGCCAGCCAGGGACACCAAAACGTGGCGGCCAGTATACCACAATATGGTTTTAGTGGAATGGGAATGAGTGGAGAGCACCAAAGGCCGAGCTTGTCCCTATGGTTGAACCAAGGAAATCCCCAGATGAATCCTCTTGATGTGGGAGCTAATTCAGGTCTTTACGTGTCATCGAGTTCTTCAGGTTTGCCTGAGATTGTGCAAATGTCCCAAGCCAATTCCTTTGCCGGTCCTTCACTGTCTAATTTTGGAATACCTCCTCCAAATTCAGCAAATGCAAACCTTTCTCTATCGCCACTTCCTATTGGGAAAAAAGGAGATGCAGGTGGAACTGGAAGCCTCGCCTCGATGTATTCTGAGGGTCAAAACAAACAATCAAAGCCACCTTCCCCCATGTCAGCTACTGCGCTTCTTCAGAAGGCAGCTCAAATGGGTTCTACTAGAAGCACCAATCCCTCAATGTTCAGCGGTAGTTTTGGAGTGATAAGCTCTACCTCAACTCAGGTTAGTACTAGTCTAAATGCTAATGTCAACCCCGACCAATCGTTTCAAAATCAAGGAATGAAGCAGCCAGAGAGTTTTGCTTCAAGTAGCAGCACTGCAGGTGCAGGTGCAGCTGCCATGCTTGGAAATAGTGACTTTAGTTCATTGACGCATACATCAAACAGTAGTCTTGATCAACTCTTGATGCCAAGCAATGGGAAACAAGCCGGTGAACAAGTGCGATTGAAGCTCCATCATGGTTCAAACGCAGTGGAAAATCATGCTTTAACAAGAGATTTTCTAGGAATGGGTGGAGGACAAGGAGCTGGCCCTCCATTCCTACCCCAAGAGCTAGCAAAGTTCGCTTCCATAGGCTCCCCAATGGGTTTGAGCCAATTCACTGCCAATCAATGA 1587 0.4675 MQMMPGDPFSLSTSIGGFAQSQSQEQNTNPKAKPNPAPTGKKKRNLPGTPDPDAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVIRKKVYICPEKTCVHHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHTKTCGTREYKCDCGTLFSRKDSFITHRAFCDALAEESARLTSVASTNLNFKNEDVINSQPSLGHGFASQGHQNVAASIPQYGFSGMGMSGEHQRPSLSLWLNQGNPQMNPLDVGANSGLYVSSSSSGLPEIVQMSQANSFAGPSLSNFGIPPPNSANANLSLSPLPIGKKGDAGGTGSLASMYSEGQNKQSKPPSPMSATALLQKAAQMGSTRSTNPSMFSGSFGVISSTSTQVSTSLNANVNPDQSFQNQGMKQPESFASSSSTAGAGAAAMLGNSDFSSLTHTSNSSLDQLLMPSNGKQAGEQVRLKLHHGSNAVENHALTRDFLGMGGGQGAGPPFLPQELAKFASIGSPMGLSQFTANQ 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02539 528 MobiDBLite consensus disorder prediction 345 382 - -
Bach1g02539 528 Gene3D Classic Zinc Finger 126 204 - -
Bach1g02539 528 Gene3D Classic Zinc Finger 48 123 - -
Bach1g02539 528 MobiDBLite consensus disorder prediction 1 34 - -
Bach1g02539 528 FunFam protein indeterminate-domain 5, chloroplastic-like 125 204 - -
Bach1g02539 528 SUPERFAMILY beta-beta-alpha zinc fingers 69 167 IPR036236 -
Bach1g02539 528 ProSiteProfiles Zinc finger C2H2 type domain profile. 70 92 IPR013087 -
Bach1g02539 528 MobiDBLite consensus disorder prediction 1 53 - -
Bach1g02539 528 MobiDBLite consensus disorder prediction 402 429 - -
Bach1g02539 528 Pfam Zinc-finger double-stranded RNA-binding 70 92 IPR022755 -
Bach1g02539 528 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 21 502 IPR031140 -
Bach1g02539 528 MobiDBLite consensus disorder prediction 326 382 - -
Bach1g02539 528 FunFam protein indeterminate-domain 12-like 49 118 - -
Bach1g02539 528 SMART c2h2final6 147 167 IPR013087 -
Bach1g02539 528 SMART c2h2final6 112 142 IPR013087 -
Bach1g02539 528 SMART c2h2final6 70 92 IPR013087 -
Bach1g02539 528 ProSitePatterns Zinc finger C2H2 type domain signature. 72 92 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02539 Bach-Chr1 36609521 36611414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02539 1 257 IDZ Gene Family AT5G03150 65.950 4.57e-133 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach1g02539 zf-C2H2_jaz 7.8e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02539 K25870 - gmx:100811274 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00783 8 5150628 5152503 Bach1g02539 1 36609521 36611414 BWGD
Bach1g02539 1 36609521 36611414 Bach1g02539 1 36609521 36611414 ECH