Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02533 ATGGGTAACATAGGAAGTAGCAGCGCTAACACTCGTCGGAGAAACGGTGGAAGGCGGGGCCATCCCCCACCGCCGCCACCGGTAACGCCACAGCCTGAGATCACGGCCAATCGGTTTGTATATCCTGCCGCTACACCGTACCCATCACAATATCCAAACCCGAATCCTCCTCCCCATTACCAGTACTCAGGTTACTATCCCCAACCACCACCAGCTATGCCGGTGCCTTTACCTGCTCCTTACGATCACCATAATCGTATGGGGTCTCATCCGCACTTGGACCCCGCATGGATGGGCGGGAGGTACCCTTGCGCGATGATGTCTGCACCTGCGCCTTATGTGGAACATCAGAAGGCGGTTACTATAAGGAATGATGTTAATATCAAGAAAGAGACACTAATGATTGATCCTGATGAGGAAAATCCGGGGAAGTTCCTCGTGGCATTCACATTTGATGCCACAGTTCCTGGCAGCATCACCATATTTTTCTTTGCAAAAGAAGGTGAAGGCTGCAACCTTACACCAACAAAGGAAAGCCTTGCACCTGTGACCGTACATTTCGAGCAAGGTCTTGGCCAGAAGTTTAGACAGCCAGTTGACTCTGGTATTGATTTTTCTATATTTGAGGAGTCAGAGTTATTGAAAGTGGGTAACTTGGATGTGTACCCTCTGGCAGTGAAGGCGGATGCATCCTCTGTTAGTAATGATGAATCAAGCGAAACTCCAACATCTGGTGCCTCAAACTCTCAGATAACTCAAGCGGTATTTGAGAAAGAGAAAGGAGAATTCCGGGTGAAGGTAGTGAAGCAGATATTGTGGGTGAACGGAAAGAGGTATGAGCTGCAGGAGATATATGGTATTGGAAATTCAGTTGAGAGTGACGTAGATGGGAATGACCCTGGAAAAGAGTGTGTTATCTGCTTGTCAGAGCCTCGGGACACAACTGTGCTTCCCTGTCGACACATGTGCATGTGTAGCGCATGTGCAAAGGTTTTGAGGTTCCAGACAAATAGATGCCCAATTTGCAGACAACCAGTTGAGAGGCTTCTGGAGATAAAGGTCAACAACGGACCCGAGGAATGA 1083 0.4866 MGNIGSSSANTRRRNGGRRGHPPPPPPVTPQPEITANRFVYPAATPYPSQYPNPNPPPHYQYSGYYPQPPPAMPVPLPAPYDHHNRMGSHPHLDPAWMGGRYPCAMMSAPAPYVEHQKAVTIRNDVNIKKETLMIDPDEENPGKFLVAFTFDATVPGSITIFFFAKEGEGCNLTPTKESLAPVTVHFEQGLGQKFRQPVDSGIDFSIFEESELLKVGNLDVYPLAVKADASSVSNDESSETPTSGASNSQITQAVFEKEKGEFRVKVVKQILWVNGKRYELQEIYGIGNSVESDVDGNDPGKECVICLSEPRDTTVLPCRHMCMCSACAKVLRFQTNRCPICRQPVERLLEIKVNNGPEE 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02533 360 Pfam Zinc finger, C3HC4 type (RING finger) 302 348 - -
Bach1g02533 360 PANTHER MAHOGUNIN 1 354 IPR045194 GO:0061630
Bach1g02533 360 SUPERFAMILY RING/U-box 303 349 - -
Bach1g02533 360 SMART ring_2 304 342 IPR001841 -
Bach1g02533 360 MobiDBLite consensus disorder prediction 47 67 - -
Bach1g02533 360 ProSiteProfiles Zinc finger RING-type profile. 304 343 IPR001841 -
Bach1g02533 360 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 288 353 IPR013083 -
Bach1g02533 360 MobiDBLite consensus disorder prediction 1 67 - -
Bach1g02533 360 CDD mRING-HC-C3HC5_MGRN1-like 302 343 IPR045195 -
Bach1g02533 360 FunFam probable E3 ubiquitin-protein ligase LOG2 288 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02533 Bach-Chr1 36581700 36583677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02533 100 323 C3H Transcription Factor Family AT3G09770 66.379 1.02e-101 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02533 - - qsa:O6P43_006673 510.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00789 8 5183050 5186400 Bach1g02533 1 36581700 36583677 BWGD
Bach1g02533 1 36581700 36583677 Bach1g02533 1 36581700 36583677 ECH