Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02525 ATGATTGCATTTATGGATTCAAAGGAGAAATTGAAAGAGATGGAAAAATGTTTGGACCCTCAACTATGGCATGCCTGCGCCGGCGGAATGGTGCAAATGCCAGCGGTGAACGCTAAGGTGTTGTACTTCCCTCAAGGCCACGCCGAGCATGCATGTGGACCTGTGGACTTCAGAAGTTGCCCCAGGGTTCCACCTTGCATTCTATGCAGAGTTGTTGCTATCAAATACATGGCTGATCCTGAGACAGACGAGGTGTATGCCAAACTCAGGCTTGTTCCTGCGAATGTTAATGAGGGTGGTTATGACGACGATAGCATTGGAGGAATGAAAGGATCTGAAAGTCAAGATAAACCTGCTTCATTTGCAAAAACATTGACACAGTCCGATGCCAACAATGGTGGTGGGTTTTCTGTTCCTAGATATTGTGCAGAGACAATATTTCCTCGTTTAGACTACTCGGCGGAACCCCCGGTTCAGACCATCCTTGCTAAGGATGTTCATGGGGAAACATGGAAATTCAGGCACATTTACCGAGGCACACCAAGGCGACATCTTTTGACGACTGGGTGGAGTACTTTTGTGAATCATAAAAAGCTGGTTGCAGGGGATTCAATTGTGTTTCTAAGAGCAGAGAATGGGGATCTGTGTGTTGGGATTCGGCGAGCTAAAAGGGGAATTGGAGGTGGACCAGAGTGTTCATCTGGGTGGAATCCCGCTGGTGGGAACTGTTCTTTGCCATATGGAGGATTCTCGGCGTTGTTGAGGGACGATGATAACAAGTTACTGAGAAATGGTAACAACAATTCAAATGGGAGTACTCTAATGGGGAAGGGGAAAGTGAGGCCTGAAGCTGTTATGGAAGCTGTAACTCTTGCTGCCAATGGTCAACCATTTGAGGTTGTTTACTATCCTCGAGCTAGTACTCCTGAGTTTTGTGTGAGGGCCTCCTTGGTTAAAGCAGCAATGCAGATTATGTGGGTTTCTGGAATGAGGTTCAAGATGGCCTTTGAAACTGAGGATTCCTCTCGGATAAGTTGGTTTATGGGAACTATATCTTCAGTTCAGGCAGCTGATCCACATTTCTGGCCTGATTCGCCTTGGAGGCTTCTCCAGGTTACATGGGATGAGCCAGATTTACTTCAAAATGTGAAACGGGTGAGCCCGTGGCTGGTTGAATTGGTATCAAACATGCCTGCTGCCATTCATCTTTCCCCTTTCTCACCACCAAGGAAGAAATTGAGATTGCCCCAACACCCACACCCGGATTTTGGTCTTGATGTCCAAATTCCAGTGCCAACATTTCCCAGCAATCTCCTAGGGCCAAGTAACCCCTTTGGTATTCTACCCGAAAGCACTCCTGCTGGCATGCAGGGAGCCAGGCATGCTCATTATGGTCTACCTTTATCCAAACTGCAGTCAGGTCTATTTCCGGTCGGTTTCCCGTCACTTGATCACGCTGCTACTGCTACACCAACAAGGATCTTCAATAACTCCTCAACGTATCAAAACCCCAGCATGAGTGAAGTCTCTTGCTTACTTTCCAATGCAAATTCCTCCCACTCTCCTAAGAAACTTGATCATGTCAAGACACAGACACCGCAGCTTGTGCTTTTTGGGCGAACAATTCTCACCGAGCAACAGATATCTCTTAGTTGCTCCGGTGATACAGTCTCCCCAGTTACAGGAAATAGTTCATCTGATGGGAATGCTGATAAAATCACTAATTTTTCTGATGGTTCTGGATCTGCTCTTCATCAACAAGAACGCTCCTCTTGCGACAGGTTCCCATGGTACAAGGATAATCGTCTAGATATCGATGCCAATTTGGAGACTGGTCACTGTAAAGTTTTTATGGAATCAGAAGATGTTGGTCGCACATTGGACCTCTCCTTACTTGCCTCTTACGATGAACTCCATACAAGGTTAGCAGACATGTTTGGCATAGACAAATCTGAGATGCTAAGCCATCTTCTATACCGTGATAAAACAGGGGCACTCAAACACATTGGAGATGAACCATTCAGTGATTTTAAGAAAACAGCCAGGAGGTTGACGATTCTAATGGATTCTGGCAGCGACAATGTAGGTGAAAGGAGGCAATCTGATCTAATTTTTTGA 2118 0.4599 MIAFMDSKEKLKEMEKCLDPQLWHACAGGMVQMPAVNAKVLYFPQGHAEHACGPVDFRSCPRVPPCILCRVVAIKYMADPETDEVYAKLRLVPANVNEGGYDDDSIGGMKGSESQDKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGGGPECSSGWNPAGGNCSLPYGGFSALLRDDDNKLLRNGNNNSNGSTLMGKGKVRPEAVMEAVTLAANGQPFEVVYYPRASTPEFCVRASLVKAAMQIMWVSGMRFKMAFETEDSSRISWFMGTISSVQAADPHFWPDSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAAIHLSPFSPPRKKLRLPQHPHPDFGLDVQIPVPTFPSNLLGPSNPFGILPESTPAGMQGARHAHYGLPLSKLQSGLFPVGFPSLDHAATATPTRIFNNSSTYQNPSMSEVSCLLSNANSSHSPKKLDHVKTQTPQLVLFGRTILTEQQISLSCSGDTVSPVTGNSSSDGNADKITNFSDGSGSALHQQERSSCDRFPWYKDNRLDIDANLETGHCKVFMESEDVGRTLDLSLLASYDELHTRLADMFGIDKSEMLSHLLYRDKTGALKHIGDEPFSDFKKTARRLTILMDSGSDNVGERRQSDLIF 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02525 705 Gene3D - 608 695 - -
Bach1g02525 705 CDD B3_DNA 120 221 IPR003340 GO:0003677
Bach1g02525 705 Gene3D - 119 223 IPR015300 -
Bach1g02525 705 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 15 689 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bach1g02525 705 SUPERFAMILY DNA-binding pseudobarrel domain 114 224 IPR015300 -
Bach1g02525 705 Gene3D - 326 400 - -
Bach1g02525 705 SMART B3_2 121 223 IPR003340 GO:0003677
Bach1g02525 705 ProSiteProfiles B3 DNA-binding domain profile. 121 223 IPR003340 GO:0003677
Bach1g02525 705 Pfam Auxin response factor 288 371 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bach1g02525 705 MobiDBLite consensus disorder prediction 554 585 - -
Bach1g02525 705 FunFam Auxin response factor 119 223 - -
Bach1g02525 705 ProSiteProfiles PB1 domain profile. 611 691 IPR000270 GO:0005515
Bach1g02525 705 FunFam Auxin response factor 326 399 - -
Bach1g02525 705 Pfam B3 DNA binding domain 121 222 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02525 Bach-Chr1 36528749 36531196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02525 15 695 B3 DNA Binding Superfamily AT4G30080 58.790 0.0 753
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Bach1g02525 B3 1.5e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02525 - - tcc:18597960 1110.52