Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02521 ATGCATTGTAGGTTTGAGGATGATCTTGAAACACACATTAATTTAAAAGCACGAAAAGAAAGACACTTGTCCATGCCAGCAAATAGGGTGAATGCCAAAGTGCTGTATGGGAAGGATGCAACAGGCGAGTCCTTGGGGGAAAAAGAACTTTGCAGGGTGTTTTCAGAGGATTATGATGCGGCTGAGAAATTAATATTGGATCCTAGGGGATCTCGAATTAACAGATGGAACAAAATCATTTTAGTAGCATGTTTGGTTTCATTGTTTGTGGATCCCCTATTCTTTTACTTGCCAGTGGCTACCAGAGACAAATGCATTGATATATCTCCCACCCTCGCTGTGCTTGCCACCATAATTCGGTCTATGGGTGATATATTTTACATTATTCAGATTTTTGTTCGGTTTCAAACTGCTTATGTTGCTCCTTCCTCGCGTGTTTTTGGTAGAGGAGAGCTCATTCTAGACCCTTCAAAGATTGCAGCAAGATACCTTAGCAGAGATTTTTGGCTTGACTTAGTGGCTGCTCTGCCTCTCCCCCAGGTGCTGATATGGGCAGTAATTCCAAACCTGAAGGCACATATGATTGCTTCAAGGCACGTTCTACGCCTTGCTTCCATTTTCCAGTATCTCTTGAGGCTATATCTTATCTTCCCTTTATCATCTGAAATTGTGGAGGCAAAAGGTGTGATGATGGAGAAAGCCTGGACTGGGGCAGCATATAACCTGATGCTCTATATGCTGGCAAGTCATGTTTTGGGATCGTCTTGGTACGTGTTATCAATTGAACGGCAAGACGAATGCTGGAAGAAAGTATGTAGTCTTGAGAAGCCAGATTGCCAGTATCATTATCTTGACTGCAAAAGCATAGGTGACCCTGCTAGGGCAGCTTGGTTCAGAACAAGCAATCTCTCACATCTATGTGATCAAGACAGCGATTTCTTCAAGTTTGGCATTTTTGCTGATGCTCTCACTTCGGACATTACTAGCGCAAAATTCTTCAACAAATACTACTATTGTCTTTGGTGGGGACTGAAAAATCTTAGCTCTATAGGACAGAATCTCCTCACAAGCACTCATGTTGCAGAGATAAATTTTGCTATAATCATTGCAATTCTTGGGCTGGTGCTTTTTGCACTGCTCATAGGCAATATGCAAACATACCTGCAATCTACGACGATGCGACTTGAAGAATGGAGAATCAGAAAGACAGACACTGAACGTTGGATGCATCACAGGCAGCTACCCAACCACCTGAAGCAAAACGTACGACGCTATGACCTATTCAGATGGGTTGCTACTCGTGGAGTTGACGAGGAAACCATTCTCACAAATCTCCCTGTTGATCTCAGACGAGACATCAAACGCCACCTCTGCCTTAATCTAGTTCGACAAGTACCACTGTTTGATCAAATGGATGAGAGGATGCTAGATGCTATATGTGAAAGACTGAAGCCTTCGCTGTGCACTGAAGGAACTTGCCTAGTTCGTGAGGGTGACCCAGTGAATGAAATGCTGTTTATTGTCAGGGGCCATCTGGATTCTTATACCACAAACGGTGGCAGAACTGGGTTCTTCAATTCATGCAGAATAGGCCCTGGTGACTTCTGTGGGGAGGAGCTGTTGCCATGGGCCTTGGACCCTCGTCCAAGTCTTGTCCTTCCTTCATCAACTCGCACAGTGAAAGCAATCACAGAAGTGGAAGCTTTTGCCCTCATAGCAGAGGACTTGAAATTTGTGGCAGCCCAATTCCGGAGGCTACACAGTAAACATCTCAGGCACACGTTCAGGTTTCACTCCCACCAATGGAGGACATGGGCTGCTTGCTTTATACAAGCAGCTTGGTTTAGATACAAAAGAAGGAAAGAGGCATCTGAGCTAAGGAAAATGGACAAATTGATGCTGCAATGGCATCGCCATCAAACTGCCATGGAAATGGAAATGGAACGTTTCTCTGCACCACTCACTCTGCAATCCCATACGGGCTCCACTCCTGCCATGTATGCAACAAATGTGGGAGCCACCCCAAGAATAGGAGGCAGCTTGCGATATGGTGCCGATCTTGACATTCTCGGTTCATTAAGAAAACCCATTGAACCAGACTTTACAGTTGAAGATATATGA 2121 0.446 MHCRFEDDLETHINLKARKERHLSMPANRVNAKVLYGKDATGESLGEKELCRVFSEDYDAAEKLILDPRGSRINRWNKIILVACLVSLFVDPLFFYLPVATRDKCIDISPTLAVLATIIRSMGDIFYIIQIFVRFQTAYVAPSSRVFGRGELILDPSKIAARYLSRDFWLDLVAALPLPQVLIWAVIPNLKAHMIASRHVLRLASIFQYLLRLYLIFPLSSEIVEAKGVMMEKAWTGAAYNLMLYMLASHVLGSSWYVLSIERQDECWKKVCSLEKPDCQYHYLDCKSIGDPARAAWFRTSNLSHLCDQDSDFFKFGIFADALTSDITSAKFFNKYYYCLWWGLKNLSSIGQNLLTSTHVAEINFAIIIAILGLVLFALLIGNMQTYLQSTTMRLEEWRIRKTDTERWMHHRQLPNHLKQNVRRYDLFRWVATRGVDEETILTNLPVDLRRDIKRHLCLNLVRQVPLFDQMDERMLDAICERLKPSLCTEGTCLVREGDPVNEMLFIVRGHLDSYTTNGGRTGFFNSCRIGPGDFCGEELLPWALDPRPSLVLPSSTRTVKAITEVEAFALIAEDLKFVAAQFRRLHSKHLRHTFRFHSHQWRTWAACFIQAAWFRYKRRKEASELRKMDKLMLQWHRHQTAMEMEMERFSAPLTLQSHTGSTPAMYATNVGATPRIGGSLRYGADLDILGSLRKPIEPDFTVEDI 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02521 706 Pfam Ion transport protein 76 394 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bach1g02521 706 ProSiteProfiles cAMP/cGMP binding motif profile. 467 552 IPR000595 -
Bach1g02521 706 FunFam Cyclic nucleotide-gated ion channel 1 394 458 - -
Bach1g02521 706 CDD CAP_ED 467 598 IPR000595 -
Bach1g02521 706 PRINTS EAG/ELK/ERG potassium channel family signature 247 257 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bach1g02521 706 PRINTS EAG/ELK/ERG potassium channel family signature 362 373 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bach1g02521 706 PRINTS EAG/ELK/ERG potassium channel family signature 380 389 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bach1g02521 706 PRINTS EAG/ELK/ERG potassium channel family signature 430 437 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bach1g02521 706 PRINTS EAG/ELK/ERG potassium channel family signature 131 140 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bach1g02521 706 PRINTS EAG/ELK/ERG potassium channel family signature 336 353 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bach1g02521 706 Gene3D - 76 391 - -
Bach1g02521 706 SUPERFAMILY Voltage-gated potassium channels 67 389 - -
Bach1g02521 706 Gene3D Jelly Rolls 465 585 IPR014710 -
Bach1g02521 706 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 55 651 - -
Bach1g02521 706 SMART cnmp_10 467 598 IPR000595 -
Bach1g02521 706 SUPERFAMILY cAMP-binding domain-like 397 590 IPR018490 -
Bach1g02521 706 FunFam Cyclic nucleotide-gated ion channel 1 465 583 - -
Bach1g02521 706 Pfam Cyclic nucleotide-binding domain 490 577 IPR000595 -
Bach1g02521 706 Gene3D Helix hairpin bin 393 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02521 Bach-Chr1 36493724 36496368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02521 40 704 Ion Channels AT2G28260 65.165 0.0 899
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02521 K05391 - gmx:100815543 1083.55