Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02517 ATGGAAACTGTGACCAGCAAGATCAATGGCTACCACCCAGGCTCCACCGAGAGCTTCTGCTTGTCTAATGCCAATGGAGGAGCAGCAGCAGCAGCAGCTGACCCGTTAAATTGGGGCGTGGTGGCTGAGTCGCTGAAAGGCAGCCATTTGGACGAGGTGAAGCGCATGGTGGCTGAGTACCGGAAGCCGGTGGTGCGGCTCGGAGGCGAGACACTCACGGTTTCCCAGGTTGCTGCCATCGCCACAAATGACAAAGGCGTTAAGGTTGCCCTGTCGGAGTCGGCTAGAGCCGGCGTTAAGGCCAGCAGTGACTGGGTCATGAATAGCATGAACAATGGTACTGATAGCTATGGTGTCACCACTGGCTTTGGCGCAACATCACACAGAAGAACCAAACAAGGTGCTGCTCTCCAAAGCGAGCTCATTAGATTTTTGAATGCTGGAATATTTGGCAACGGAACAGAGACATGTCACACTCTGCCCCACACAGCAACCAGAGCAGCTATGCTAGTTAGAATCAACACTCTCCTCCAAGGTTACTCAGGGATTAGATTTGAGATCCTAGAAGCAATCACAAAGCTCATAAACAACAACGTCACCCCATGCTTGCCACTTCGTGGTACCATCACTGCTTCCGGTGATCTTGTTCCCCTTTCTTACATTGCTGGTTTGCTAACTGGCCGACCAAATTCCAAAGCTGTCGGACCCTCTGGTGAAATCCTCAATGCTAAGGAAGCTTTCCAACAAGCTGGCATTGAATCTGACTTCTTTGAATTGCAGCCCAAGGAAGGGCTTGCTCTTGTTAATGGCACTGCTGTTGGTTCTGCTTTGGCTTCTATGGTTCTTTTCGAGGCTAACATATTAGCTGTGCTGTCAGAAGTTCTATCAGCCATTTTCGCTGAAGTGATGCAAGGGAAGCCTGAATTCACTGATCATTTGACTCATAAATTGAAGCACCATCCTGGCCAAATTGAAGCTGCTGCTATTATGGAACACATTTTGGATGGAAGCTCCTATATTAAAGCTGCTAAGAAGTTGCATGAGATGGATCCCTTGCAGAAGCCTAAACAGGATCGCTATGCCCTTCGAACTTCACCGCAATGGCTTGGCCCTCAGATTGAAGTGATCAGATTTGCAACAAAATCAATTGAGAGAGAGATAAACTCTGTGAATGATAACCCTTTAATTGATGTTTCAAGGAATAAGGCTTTGCACGGTGGGAACTTCCAGGGAACCCCAATTGGTGTCTCAATGGACAATACCCGTTTGGCTATTGCTTCCATTGGCAAACTCATGTTTGCTCAATTCTCTGAGCTTGTTAATGATTTCTACAACAATGGGTTGCCATCGAATCTCACTGCCAGCAGAAACCCCAGCTTGGATTATGGTTTTAAGGGGGCTGAGATTGCCATGGCATCTTACTGCTCTGAGCTCCAATACCTTGCAAACCCAGTTACAAACCATGTCCAAAGTGCTGAGCAACACAACCAAGATGTGAACTCTCTGGGTTTGATTTCTTCTAGGAAAACAAAGGAAGCCGTTGAGATACTGCAGCTCATGTCTTCCACATTCTTGGTCGCACTTTGCCAAGCAATTGACTTGAGGCATTTGGAGGAGAATCTGAAGAACACAGTCAAGAACACTGTTAGCCAAATTGCAAAGAGAACACTTACCACTGGTGTCAATGGAGAACTCCACCCTTCCAGATTTGCAGAGAAAGATTTGCTCAAAGTGGTTGACAGGGAGTATTTATTTACTTATGCCGACGACCCCTGCAGTACCACCTACCCATTGATGCAGAAACTGAGGGAAGTTCTTGTGGACCATGCATTAGCTAATGCAGAAAATGAGAAGAATTCCAACACATCCATCTTTCACAAGATTGCAGCTTTTGAGGAAGAGTTGAAGTCTCTATTGCCAAAGGAAATCGAAGGCGCGAGATTAGCATACGAGAATGGCAACACAGCAATTCCAAACAAGATTAAGGAATGCCGGTCTTACCCATTGTACAAGTTTGCCAGAGAGCAACTGGGAACTGAGTTGCTAACAGGAGAAAAGGTGAGGTCCCCAGGTGAGGAGTGTGAAAAAGTTTTCACAGCAATGTGCCAGGGCAAGATCATTGATCCTCTGCTGGAATGTCTTGGGGAGTGGAACGGTGCACCTCTTCCAATCTGCTAG 2178 0.4697 METVTSKINGYHPGSTESFCLSNANGGAAAAAADPLNWGVVAESLKGSHLDEVKRMVAEYRKPVVRLGGETLTVSQVAAIATNDKGVKVALSESARAGVKASSDWVMNSMNNGTDSYGVTTGFGATSHRRTKQGAALQSELIRFLNAGIFGNGTETCHTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKLINNNVTPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPSGEILNAKEAFQQAGIESDFFELQPKEGLALVNGTAVGSALASMVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYIKAAKKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTNHVQSAEQHNQDVNSLGLISSRKTKEAVEILQLMSSTFLVALCQAIDLRHLEENLKNTVKNTVSQIAKRTLTTGVNGELHPSRFAEKDLLKVVDREYLFTYADDPCSTTYPLMQKLREVLVDHALANAENEKNSNTSIFHKIAAFEEELKSLLPKEIEGARLAYENGNTAIPNKIKECRSYPLYKFAREQLGTELLTGEKVRSPGEECEKVFTAMCQGKIIDPLLECLGEWNGAPLPIC 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02517 725 PANTHER HISTIDINE AMMONIA-LYASE 30 725 IPR001106 -
Bach1g02517 725 NCBIfam phenylalanine ammonia-lyase 34 714 IPR005922 GO:0005737|GO:0006559|GO:0016841
Bach1g02517 725 SUPERFAMILY L-aspartase-like 34 725 IPR008948 GO:0003824
Bach1g02517 725 Gene3D Fumarase/aspartase (Central domain) 272 720 - -
Bach1g02517 725 Gene3D - 25 271 IPR024083 -
Bach1g02517 725 Pfam Aromatic amino acid lyase 72 547 IPR001106 -
Bach1g02517 725 FunFam Phenylalanine ammonia-lyase 538 659 - -
Bach1g02517 725 FunFam Phenylalanine ammonia-lyase 25 271 - -
Bach1g02517 725 Gene3D - 538 659 IPR023144 -
Bach1g02517 725 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 207 223 IPR022313 GO:0016841
Bach1g02517 725 CDD PAL-HAL 70 535 IPR001106 -
Bach1g02517 725 FunFam Phenylalanine ammonia-lyase 272 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02517 Bach-Chr1 36456364 36459456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02517 32 725 Monolignol Biosynthesis Gene Families AT2G37040 84.726 0.0 1256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02517 K10775 - gmx:100811101 1261.51