Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02516 ATGCCAAATTTTCCGAGAAGGTTCAAAAAGGATGGCCATCGCCACTTCTCCTTTCATCTTCAAAAGGGGAAGCCGAAGGTGGAAAATTGCATGATACTTACATCAGAACCTGAAAAGATCAACAAAAGTGTAAATCAGAGTTTGGATGGCACTTCTAAAAAGACAAGAATGGATGCTCGCAAATATAGAGAATTTGCCAGATCACGTCTCAAGAGAGGAAATGTGTATGAAGAGGAATCCAAGTTTGAATGTAACTTGGAGTTGACTAAAGAACATGTAGATGGTGCACAAGTGGATCCTCATACGAGAGATGGTATAGTTGGTGAAGATATAGTATGCTACGAATGCATGCATGGTGGAATGCTCTTGTGCTGTCATGGAAAAGGGTGTCAAAGGAGGTATCATCCCTCTTGTCTGGATCATCCTCTCAATTATGTCCCTCCTGGGGTTTGGCATTGCCCATGGTGTGTGAAAAAGAAAATAGAGTTTGGTGTGTGTTCTATTTCACATGGGATGGAATCCATCTGGGATATTAGGGAGGTGATGGAGAATGAAGTGAGGCAAAGACAGTACTTGGTCAAGTATCAGGGTCTTGCTCATGCTCACAACCGCTGGATTCCAGAAAAAGAAATGCTTCTTGAGGCGCCAAAACTCCTGGAAAAATTTAATCGAAAACTCCAGGTTATCAGGTGGAGGAGAGAGTGGACAATGCCTCATCGCTTGCTGCTAAAAAGACTTATAGTATCATCAAAGCAATATGATGAACATTTTGACGGGAATGGTGACAAAAGCGCAAATTGCCATTATGAGTGGCTTGTAAAATGGACAGGTCTGGGTTATGATCATATTACATGGGAGTTAGATGATGCTTCGTTTATGACATCTCCCGGAGGCATGAAACTCATAGCAGATTATGAAAGTCGTCATAAGGGGGCAGAAAGACTATCAAATCCTTCTGAAGATCATGAGGAGGTGAGAGCTTCTTTTGCTGAATTATCAGAGCTGCCATCTGGAGATTCACCAGGATTATATGACCACCATTTGAGTTATGCGAACAAGCTTTCCATGTGTTGGCAGAAAGGTCAGAGTGCTCTTGTTATAGATGAAAAAGTTGACCAGGAGCGGATAATGAAGGTGATTCTGTTTTTATCATCTTTGCATGATAATATAGAGAGGCCTTCTCTTATCATCTCAACTTCTGCTGCTCTCTCTGTATGGGAAGCAGAGTTCTTACATTTGGCTCCATCTGCCAATCTTGTAGTTTACAAGGGGAACAAAAATTTACGGAGTAGCATCAGGGCATTGGAGTTCTACAACGATGATGGTACCATCATATTTCAAATATTATTATCCTCTTCTGATATTGTAACTGAGGATTTACATGCTCTACAATGCATAGCATGGGAAGCAATAATAATTGATGAGTGCCAGAGCCCCCGAATTTCAAAACACTTTGACAATATCAAGATGCTAACATCTGAGATGAGGATACTTCTTGTTAGTGGACAGATCAAGGAATGCTCAGCTGACTACCTCAAACTGCTTTCCCTCCTCGGTTCTGGATCTCATGCAATAAACAGTGCTGAATTTCCTACTAGCATTTCCATGTTGAAGAAATTACTATCACAATATGTTGCATATGATTGCAAAACAAGCTCCCCTAGGTTTACAGAGTACTGGGTTCCTGCCATGCTTTCTAATTTGCAACTCGAGCAGTATTGTTCTATGCTGATTTTAAACAAAGTATTCTTATGCTCTGGTCTGAAGACTGATCCCAATGGTGCCCTCCGTGACCTGATTATCTCAACAAAAAGGTGCTGTAGCCACCCTTATCTCCTGGACCTGTCACTGCAAAGTTTTGTCACAAAAGATCGTCCTATTGAAGAGTATTTGGATATTGGAATAAAGGCAAGCGGAAAACTGCAACTTCTTGAAAAAATTCTTATTGAAGTAAAAAACCATGGGTTGAGAGCAATGATACTATTTGAGTCAACTGGTGGTTCTGGATCTATTGGAGATATTTTGGATGATGTTGTCTGTCAGAGATTTGGTAAAGATTGTTATGTACGTTATAGTAGAGGCTATACCCCTTCAAGGAAGCAAGCTGCTTTAGACATGTTTAATGACAAAGCGGGTGGAAAATTTGTCTTCTTGATTGACAATCGTGCTTGTGTTCCCAGCATTAAGCTGTCCTCGGTGGACACTATTATATTATTTGACAGTGATTGGGATCCACAAAATGACTTGAGAAGCCTACAAAGAATGTCTATAAGCTCACAGTTTGAACAGTTGAAAGTTTTCAGATTATACTCATTTTACACTGTTGAAGAAAAGGTTTTGATGCTTGCAAAGGAGGGTAAAGCTCTTGACAGCAATATGCAGTGCATAAACCAGACTATTTGTGACACCTTGCTGAAGTGGGATGCCTCCTATCTGTTCAATAAGCTAGATGACTTACATTCCTGTGGCATTTCAATCTCTGCTACAGACATTTCATCTAATCAGTCACTTTTACATGACGTAATTCATGAATTATCAACCCAACTGCCTTGTGGGAATGACACTGATTGTCATGACAGCTCATTCATATTAAAAGTAGAGCAGAATGGAGGGATATATTCGAGAAACAATAAATTACTAGGAGAAAAGTTGATGAAGAAGTTGGACAGTGGACCGTCTGCTTTTTCCTGGACTAATCTACTAGAAGGAAGGAATCCTCGCTGGAAATTTTTATCTATTTCACCACAGAGGATCAGGAAAAAAGTCAAATACTGTGATCAATTACTACAAAACTCTGAATTTGAAAATGTTTTAACTTTGAGAAAGAGGAGGTTGTCCAAGGATACTGTGGGTCCCATATATGTGAACTCCAGATTGAAGAACAAGAAGAAACAAAGTGCTGTCAATAAAGCATGTAAAGCGAATGGCAATAAGATGGTTGACTCAAAGATCCCTGATTCCATATCCATGCGTCCTTCAACTAGTGAAATTGAGAGATTGTCTGCATCAGATATGGATTCTGTAGAACAAAGAGAACTGCTTCTTGTGCCGAAGAGCACTGAATTCCTGCCAAAGCCAGATATATCAGGTCTCTGTGATGTTCTTAGATTTTCGAAAGAAATCAAGGCTGTTGCCTTAAAGATTCTCAAGCACATATTAAAACATTATGATGTTGATTGGCATGAAGTTTCTACAGTGCAAGCTTTTGAAATATCTGTGTGTTGGCTAGCAGCTTCTGTGTTAAAACACAAGATTGATAAAAAGGAATCACTTGCACTTGCAAAACTGCACTTACAGTTTGACTGTAAGGAAGAGGAAGCCACATACGTATACTCAAAACTGAAAATGATTGAGAAGGCTCTGTCAAGTTATTTAGAAAAGCCCCTACATGTTGAGAAATGTTATATAAAGGGTAGAGGCTCCAAGACAACGGAGGTGACAAGTTTGGTAGAGGAGGAGATGCAAATAGGATTCAAGGGTCCTGATAGTTCTCATGTTGTGGAATCTGCAACAGACGCTCTGGGTTTTAGAAGTAATTCTCCTTTGCAAGGCCAGAGTTGTGCAGATAAACTTACTTCTACAGCTCCTGAAGTTTGTCAAATTCAAAAGCCATCTGGTGTTGTGCCCATTGAAGCAGATGTACTCTCTTTGCAATTGGATGCAGAAAATGACGAAATGAATGCTCTGGCCTCAGAAATAGTAGAAGGTTCTTTCCTCGAGGATCAGAAGAAAGCCCCAGATTCCAGTATGGATCCTTGTACTAGTACAACTGTCATGTATCCTCTGGTTAGGCAGAGTCCTGATAGAAATGCAGAGAGTACAGATTTTGTTGGGGAAGCTTGTGAAGATGCTCAACTTTTAATGAATGTTTTGGGTGCTGGTGACAACTCTTTGAACGTGCTTGCTCATCCTGAGCAACTTAACTGTGCTGAGATAGATGCTAAAACTTTCACTGTTGCTGCTGTTACTCAGGAGAGACAAGTATGTGACGAGTCTACTGTTTTGGAGTCTACTAATACTACCTCACCTTATTTGCCTCCATCACATGCAAATGTGGGGCCATTGCCTCAGATGTGTACTTCTGGTAGACTATCATTTTCTGTGGTGAACTCACCTAGTACAGTCATGCCTTTAAATATGAATCTTCATCAGGATATTGGAGATTGTTTCAACAATGATGAGGCTGAACTTATGCTACAATATGACCCACTGGAATTGTTTAATTCCTCTTTTGTGCAATCCATGTCGAATGTACCACAGCAACCCTGTGCTCTTCTATCCATAAGTGAAAATGCCATGCCTGTTTCATGCCACAGTACTAACAACACAGGATATTTGAGCAGTGATCCCTTTCAAGATTCTCCTTTCACATCTGAAATGCCTGATTTTCCTTGCTCAGTTCCACTGCAAATTGAAATGGAAAGAATACAAAAGGAGGCAGAAGAAGCCATTGGAATACATAACAAAGCAGCCTTGCAGCTTCGTTCTGACTTCGAAAAGGATATTGAGAAAATACGTGTAAAGTATGATAAATTGCTTCAGAATGTTGATAGTACACAAGCACTAAAGAGAAAGGAACTTGAGACGCATTACAACACAGTTCAAGTGAATATGTTATTGGCCGAGGTGTTGGCACGTAATTGTGAAAATTACGAAATGCCTGGGTTACAATGTTCAGAACAAGGTCTTTTTACTGAGCTGCTTCTGACTATCCTTCCCCCTTCAGTGGCAGTACTCAGTTTCTCGAGTTCTCGGTCATCAATGCACCAGACGGGTCATATGCCGGCTGATGGAGTTGAACAATATTTCAGTGGCCTACCCATAAATCACGCATCCGTGGCTCCTCGAGTGGAGGTGGTTAATCCTTCAACAGCCTCTGCAGAAATAAGCTCAGTTAGACAGTGCTTTAGTTCCCCGAGTCTGTTCTCAAGAAGTCTTCATAGTGGCTTTGACTTGCGAGCCCCAGCCCCACATCTTAGAGTCTCTATGTCAGCTGCTTCTTCAATACCCCATGTGCCAATCCCATGGAGCGGGATATCAGACCAGCAACTGGGACTTAACTCATTCAATTGCAACATCCGTAATGCTGAGTGA 5094 0.4083 MPNFPRRFKKDGHRHFSFHLQKGKPKVENCMILTSEPEKINKSVNQSLDGTSKKTRMDARKYREFARSRLKRGNVYEEESKFECNLELTKEHVDGAQVDPHTRDGIVGEDIVCYECMHGGMLLCCHGKGCQRRYHPSCLDHPLNYVPPGVWHCPWCVKKKIEFGVCSISHGMESIWDIREVMENEVRQRQYLVKYQGLAHAHNRWIPEKEMLLEAPKLLEKFNRKLQVIRWRREWTMPHRLLLKRLIVSSKQYDEHFDGNGDKSANCHYEWLVKWTGLGYDHITWELDDASFMTSPGGMKLIADYESRHKGAERLSNPSEDHEEVRASFAELSELPSGDSPGLYDHHLSYANKLSMCWQKGQSALVIDEKVDQERIMKVILFLSSLHDNIERPSLIISTSAALSVWEAEFLHLAPSANLVVYKGNKNLRSSIRALEFYNDDGTIIFQILLSSSDIVTEDLHALQCIAWEAIIIDECQSPRISKHFDNIKMLTSEMRILLVSGQIKECSADYLKLLSLLGSGSHAINSAEFPTSISMLKKLLSQYVAYDCKTSSPRFTEYWVPAMLSNLQLEQYCSMLILNKVFLCSGLKTDPNGALRDLIISTKRCCSHPYLLDLSLQSFVTKDRPIEEYLDIGIKASGKLQLLEKILIEVKNHGLRAMILFESTGGSGSIGDILDDVVCQRFGKDCYVRYSRGYTPSRKQAALDMFNDKAGGKFVFLIDNRACVPSIKLSSVDTIILFDSDWDPQNDLRSLQRMSISSQFEQLKVFRLYSFYTVEEKVLMLAKEGKALDSNMQCINQTICDTLLKWDASYLFNKLDDLHSCGISISATDISSNQSLLHDVIHELSTQLPCGNDTDCHDSSFILKVEQNGGIYSRNNKLLGEKLMKKLDSGPSAFSWTNLLEGRNPRWKFLSISPQRIRKKVKYCDQLLQNSEFENVLTLRKRRLSKDTVGPIYVNSRLKNKKKQSAVNKACKANGNKMVDSKIPDSISMRPSTSEIERLSASDMDSVEQRELLLVPKSTEFLPKPDISGLCDVLRFSKEIKAVALKILKHILKHYDVDWHEVSTVQAFEISVCWLAASVLKHKIDKKESLALAKLHLQFDCKEEEATYVYSKLKMIEKALSSYLEKPLHVEKCYIKGRGSKTTEVTSLVEEEMQIGFKGPDSSHVVESATDALGFRSNSPLQGQSCADKLTSTAPEVCQIQKPSGVVPIEADVLSLQLDAENDEMNALASEIVEGSFLEDQKKAPDSSMDPCTSTTVMYPLVRQSPDRNAESTDFVGEACEDAQLLMNVLGAGDNSLNVLAHPEQLNCAEIDAKTFTVAAVTQERQVCDESTVLESTNTTSPYLPPSHANVGPLPQMCTSGRLSFSVVNSPSTVMPLNMNLHQDIGDCFNNDEAELMLQYDPLELFNSSFVQSMSNVPQQPCALLSISENAMPVSCHSTNNTGYLSSDPFQDSPFTSEMPDFPCSVPLQIEMERIQKEAEEAIGIHNKAALQLRSDFEKDIEKIRVKYDKLLQNVDSTQALKRKELETHYNTVQVNMLLAEVLARNCENYEMPGLQCSEQGLFTELLLTILPPSVAVLSFSSSRSSMHQTGHMPADGVEQYFSGLPINHASVAPRVEVVNPSTASAEISSVRQCFSSPSLFSRSLHSGFDLRAPAPHLRVSMSAASSIPHVPIPWSGISDQQLGLNSFNCNIRNAE 1697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02516 1697 CDD CD_CSD 187 224 - -
Bach1g02516 1697 Gene3D - 554 790 IPR027417 -
Bach1g02516 1697 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 107 163 IPR013083 -
Bach1g02516 1697 Gene3D - 171 228 - -
Bach1g02516 1697 Pfam SNF2-related domain 380 535 IPR000330 GO:0005524|GO:0140658
Bach1g02516 1697 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 79 1117 - -
Bach1g02516 1697 Gene3D - 1466 1546 - -
Bach1g02516 1697 Gene3D - 245 305 - -
Bach1g02516 1697 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 643 804 IPR001650 -
Bach1g02516 1697 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 554 792 IPR027417 -
Bach1g02516 1697 Gene3D - 343 553 IPR038718 -
Bach1g02516 1697 SUPERFAMILY Chromo domain-like 234 308 IPR016197 -
Bach1g02516 1697 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 388 503 IPR027417 -
Bach1g02516 1697 Pfam Chromo (CHRromatin Organisation MOdifier) domain 177 225 IPR023780 -
Bach1g02516 1697 SMART chromo_7 169 227 IPR000953 -
Bach1g02516 1697 SMART chromo_7 234 310 IPR000953 -
Bach1g02516 1697 ProSiteProfiles Zinc finger PHD-type profile. 110 159 IPR019787 -
Bach1g02516 1697 ProSitePatterns Zinc finger PHD-type signature. 113 156 IPR019786 -
Bach1g02516 1697 Coils Coil 1495 1515 - -
Bach1g02516 1697 ProSiteProfiles Chromo and chromo shadow domain profile. 241 317 IPR000953 -
Bach1g02516 1697 Coils Coil 1212 1232 - -
Bach1g02516 1697 ProSiteProfiles Chromo and chromo shadow domain profile. 176 234 IPR000953 -
Bach1g02516 1697 SMART PHD_3 112 157 IPR001965 -
Bach1g02516 1697 SUPERFAMILY Chromo domain-like 129 231 IPR016197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02516 Bach-Chr1 36436633 36448522 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Bach1g02516 SNF2_N 2.8e-07 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02516 - K11643 gmx:100813574 1399.03