Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02479 ATGCAAGGACAGCAATTGCGTAAAGGGCCTTGGCTTCAAGAGGAAGATGAACAACTCACTTCCTTCGTTACCCGTCATGGGGAACGACGCTGGGATTCGCTCGCCAAAGTAGCTGGTATCTGCATTGCATTTGGTAAGAGTTGCAGGTTAAGGTGGATGAACTATCTTCGTCCAAATCTTAAGCATGGTCCTTTTAGTGCTGAAGAAGAGCGGTTGATTTTTCAACTTCAGCAGCAATGGGGTAACAAGTGGTCAAAGATTGCACGTAAGTCTGCCAGGAAGAACTGA 288 0.4653 MQGQQLRKGPWLQEEDEQLTSFVTRHGERRWDSLAKVAGICIAFGKSCRLRWMNYLRPNLKHGPFSAEEERLIFQLQQQWGNKWSKIARKSARKN 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02479 95 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 95 IPR017930 -
Bach1g02479 95 CDD SANT 10 56 IPR001005 -
Bach1g02479 95 SMART sant 61 94 IPR001005 -
Bach1g02479 95 SMART sant 7 58 IPR001005 -
Bach1g02479 95 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 5 89 - -
Bach1g02479 95 Gene3D - 8 60 - -
Bach1g02479 95 ProSiteProfiles Myb-like domain profile. 57 95 IPR001005 -
Bach1g02479 95 FunFam Myb transcription factor 8 61 - -
Bach1g02479 95 CDD SANT 64 90 IPR001005 -
Bach1g02479 95 SUPERFAMILY Homeodomain-like 9 87 IPR009057 -
Bach1g02479 95 Pfam Myb-like DNA-binding domain 63 90 IPR001005 -
Bach1g02479 95 Pfam Myb-like DNA-binding domain 8 56 IPR001005 -
Bach1g02479 95 ProSiteProfiles Myb-like domain profile. 3 56 IPR001005 -
Bach1g02479 95 Gene3D - 61 95 - -
Bach1g02479 95 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 60 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02479 Bach-Chr1 36170957 36171412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02479 4 90 MYB Transcription Factor Family AT5G59780 56.322 1.69e-30 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach1g02479 Myb_DNA-binding 2.7e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02479 K09422 - gmx:100783472 152.525