Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02476 ATGGAGCCCCGGATGTCGATCAGTGGAATTTCTTATCAGGACCACGAGTCTTCATCTCAACTGGGATATGCCAATTACGGGTGCTCACATTATAAGAGGAGGTGCAAGATCAGAGCACCTTGCTGCAATGAAGTTTTCGATTGCAGACATTGCCATAATGAATCTAAGAACTCGATTGAAGTGGACCCTGTTGATCGCCATGACATTCCTCGTCATGATTTGAAGAGAGTTCAACAGGTGTGCATTAACTGTGGTGTTTGCATGGGAAATTACTTCTGCTTCAAGTGCAAGTTTTTTGATGATGATGTATCAAAAAAGCAATACCATTGCGATGAGTGTGGAATCTGCAGAACTGGAGGAGAGGAGAATTTTTTCCACTGTAATAAATGTGGGTGTTGCTATTCAAAGTTGATTAGGGATTCACACCACTGTGTGGAAAAAGCATTGCATCGCAATTGCCCTGTTTGCTTTGAGTTTCTTTTCGATACAAGAAAGGAAATTTCAGTTTTGCCATGCGGTCACACTATCCATTTGGGATGTGTGAGAGAAATGGAGCGGCATTATCAGTATGCATGCCTTGTTTGCTCAAAATCATTTTGTGATATGTCGCGCATGTGGGAGAGATTGGATCGGGAGGTTGCATCAACACCTATGCCTGAAATTTATCACAATAAGATGGTTTGGATTCTCTGTAATGATTGTGGGGAAACATCTGAGGTGAGCTTTCACATTGTGGCGCACAAGTGCAACAAATGCAAATCCTACAATACAAGAAAGACACAAGGTGGGCCTCCGTATGCTCATCAAGGATTTGAAGAGATGGTCAAATGA 831 0.4236 MEPRMSISGISYQDHESSSQLGYANYGCSHYKRRCKIRAPCCNEVFDCRHCHNESKNSIEVDPVDRHDIPRHDLKRVQQVCINCGVCMGNYFCFKCKFFDDDVSKKQYHCDECGICRTGGEENFFHCNKCGCCYSKLIRDSHHCVEKALHRNCPVCFEFLFDTRKEISVLPCGHTIHLGCVREMERHYQYACLVCSKSFCDMSRMWERLDREVASTPMPEIYHNKMVWILCNDCGETSEVSFHIVAHKCNKCKSYNTRKTQGGPPYAHQGFEEMVK 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02476 276 ProSiteProfiles Zinc finger CHY-type profile. 21 98 IPR008913 GO:0008270
Bach1g02476 276 ProSiteProfiles Zinc finger CTCHY-type profile. 88 152 IPR017921 -
Bach1g02476 276 FunFam RING finger and CHY zinc finger domain-containing protein 1 224 269 - -
Bach1g02476 276 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 17 261 - -
Bach1g02476 276 Gene3D - 225 263 - -
Bach1g02476 276 ProSiteProfiles Zinc finger RING-type profile. 153 196 IPR001841 -
Bach1g02476 276 SUPERFAMILY RING/U-box 152 202 - -
Bach1g02476 276 Pfam Zinc-ribbon 200 258 IPR039512 -
Bach1g02476 276 SUPERFAMILY CHY zinc finger-like 24 97 IPR037274 GO:0008270
Bach1g02476 276 SUPERFAMILY Zinc hairpin stack 89 146 IPR037275 -
Bach1g02476 276 Pfam RING-type zinc-finger 153 187 IPR027370 -
Bach1g02476 276 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 145 224 IPR013083 -
Bach1g02476 276 SMART ring_2 153 195 IPR001841 -
Bach1g02476 276 Pfam CHY zinc finger 28 98 IPR008913 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02476 Bach-Chr1 36149699 36152169 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02476 26 265 C2H2 Transcription Factor Family AT3G18290 40.154 9.20e-49 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02476 K10144 - qsa:O6P43_006606 475.707