Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02474 TGGAAAGCAGTGCTGCAGTGATATTCACTAATCTCCGTTGAGTATGCCGATCCGTAATATCGCCGTCGGTAGGCCCGAGGAGGCCACTCACCCGGACACCTTGAAGGCTGGGTTGGCTGAGTTCATCTCCACCCTTATCTTCGTCTTCGCCGGCGAAGGATCCGGCATGGCCTTCAACAAACTCACGAACGACGGTTCCACCACCCCTGCCGGCCTCATCTCTGCCTCGCTCGCCCATGCATTCGCTCTTTTCGTCGCAGTTTCCGTCAGTGCCAACATCTCCGGAGGCCACGTCAACCCTGCTGTCACCTTCGGTGCCTTCGTCGGCGGTAACATCTCCCTCTTACGTGGCATCGTCTACTGGATCGCTCAGCTCCTTGGTTCCACCGTTGCCTGCTTGCTTCTTTGGTTCGTCACCGGAGGCCTGAGCACCCCAGCGTTCTCCCTGTCCTCTGGAGTTGGAGTATGGAATGCTGTCGTATTTGAGATCGTGATGACATTTGGGTTGGTGTACACTGTGTACGCCACAGCCCTTGATCCCAAGAAGGGCAGTGTGGGAACTATTGCCCCGATCGCAATTGGTTTCATTGTGGGAGCCAACATTTTGGCAGGTGGGGCCTTCGATGGAGCATCCATGAACCCGGCTGTGTCTTTCGGACCTGCTTTGGTGAGCTGGAGCTGGACCTACCAATGGGTCTACTGGGTTGGACCTCTGATTGGTGGTGGGCTCGCTGGCATTGTTTACGAGCTGTTCTTTATCAGCCACTCCCATGAGCAGCTCCCCACCGCTGACTACTAAGAAAAGTATCTGGCAACTGCATGAGTCACCGAATGAATGAACAGTGTGACGGATTCTTCCTTTCCTTTTCTCTTCCCTCATCCTTTGTATTTTAGTTTGCTTTGAGACTTTGTTCTTTTTTGGTGTTTCATTGGTGGGCAGTTGATCTCAATTTAAGTTATGAACATTATGTAAATCCTCGTTCTCTTTCTCCTGAGGTGACTGAGGATTCAATGTACTATTCTGCTATGCTTGAATGATTCCATTTCTTTCCCCTCTTT 1059 0.5175 MPIRNIAVGRPEEATHPDTLKAGLAEFISTLIFVFAGEGSGMAFNKLTNDGSTTPAGLISASLAHAFALFVAVSVSANISGGHVNPAVTFGAFVGGNISLLRGIVYWIAQLLGSTVACLLLWFVTGGLSTPAFSLSSGVGVWNAVVFEIVMTFGLVYTVYATALDPKKGSVGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWTYQWVYWVGPLIGGGLAGIVYELFFISHSHEQLPTADY 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02474 251 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Bach1g02474 251 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach1g02474 251 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach1g02474 251 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach1g02474 251 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach1g02474 251 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach1g02474 251 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach1g02474 251 Gene3D Glycerol uptake facilitator protein. 4 251 IPR023271 -
Bach1g02474 251 SUPERFAMILY Aquaporin-like 12 247 IPR023271 -
Bach1g02474 251 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach1g02474 251 FunFam Probable aquaporin TIP1-1 4 251 - -
Bach1g02474 251 Pfam Major intrinsic protein 14 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach1g02474 251 PANTHER AQUAPORIN-8 6 246 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02474 Bach-Chr1 36134132 36135317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02474 1 251 Major Intrinsic Protein MIP AT2G36830 80.478 1.08e-148 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02474 K09873 - qsu:112001048 435.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00851 8 5553820 5554939 Bach1g02474 1 36134132 36135317 BWGD
Bach1g02474 1 36134132 36135317 Bach8g00793 8 5209082 5210267 ECH
Bach1g02474 1 36134132 36135317 Bach1g02474 1 36134132 36135317 ECH