Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02473 ATGGAAGGCCAAGTTCCAGAGGAACTTGTGGTCATCAAGGGCAAGCGCACCAAGCGTCAAAGGCTACCCTCTCCAGCCATGGCGCCTATGCCTTCATCAACAGCTTCTGGAAGAACCAGCACTGACAATTCATCAACTTCGTCACCTGAATTGAGGGACAGTACACGAGAAGAAGAGGACATGGCTAATTGTTTGATTCTTCTAGCTCAAGGGCATGTCGGCAAAGTCTCATCACCTGAACCCGTTAACGTTGCTCAACCTCACAATAATTATGTGTACCAGTGCAAGACCTGTAACCGTTGCTTCTCTTCATTCCAAGCCCTTGGTGGACACAGAGCCAGCCACAAGAAACCTAAGTTGAATAACACAGAAGAAAAGCAAGCTGTTACTTTTCTCATTAATGAAGAGGATCATGATCTTTATGACCACGCCACCATCACAAGCACCACCCTCTCCTTGCAGTTATCAAACACAAACGGGGCTTTGTTTAGTACTAGTATTGCTAACAATAAACCCAAAGTTCACGACTGTTCCATTTGTGGGGCTGAGTTCTCATCTGGGCAAGCCTTAGGGGGTCACATGAGGAGGCACAGAAGGTTTATCAATACATCCACTACATCATCTAATTCGAGCGAAGCCAAGAAACCCAGAAATGTTTTGAAGCTGGACTTGAATCTTCCTGCACCAGAGGATGATAATTTGCAGAGGGAATCCAAGTTTCCTTTCCAATCCAAAGAAAAAGTTCTTGTCTTCTCCGCGTCTTCTCTCGTGGATTGCCATTACTGA 786 0.4567 MEGQVPEELVVIKGKRTKRQRLPSPAMAPMPSSTASGRTSTDNSSTSSPELRDSTREEEDMANCLILLAQGHVGKVSSPEPVNVAQPHNNYVYQCKTCNRCFSSFQALGGHRASHKKPKLNNTEEKQAVTFLINEEDHDLYDHATITSTTLSLQLSNTNGALFSTSIANNKPKVHDCSICGAEFSSGQALGGHMRRHRRFINTSTTSSNSSEAKKPRNVLKLDLNLPAPEDDNLQRESKFPFQSKEKVLVFSASSLVDCHY 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02473 261 ProSiteProfiles Zinc finger C2H2 type domain profile. 93 120 IPR013087 -
Bach1g02473 261 MobiDBLite consensus disorder prediction 1 58 - -
Bach1g02473 261 SUPERFAMILY beta-beta-alpha zinc fingers 92 197 IPR036236 -
Bach1g02473 261 SMART c2h2final6 93 115 IPR013087 -
Bach1g02473 261 SMART c2h2final6 175 197 IPR013087 -
Bach1g02473 261 PANTHER ZINC FINGER PROTEIN ZAT5 33 242 - -
Bach1g02473 261 Gene3D Classic Zinc Finger 156 225 - -
Bach1g02473 261 Gene3D Classic Zinc Finger 82 147 - -
Bach1g02473 261 MobiDBLite consensus disorder prediction 27 50 - -
Bach1g02473 261 Pfam C2H2-type zinc finger 174 199 - -
Bach1g02473 261 Pfam C2H2-type zinc finger 92 118 - -
Bach1g02473 261 ProSitePatterns Zinc finger C2H2 type domain signature. 177 197 IPR013087 -
Bach1g02473 261 ProSiteProfiles Zinc finger C2H2 type domain profile. 175 197 IPR013087 -
Bach1g02473 261 ProSitePatterns Zinc finger C2H2 type domain signature. 95 115 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02473 Bach-Chr1 36124160 36124945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02473 9 261 C2H2 Transcription Factor Family AT5G03510 43.836 1.28e-66 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach1g02473 zf-C2H2_6 1.4e-09 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02473 - - cave:132161809 263.462
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g02758 8 34265394 34266353 Bach1g02473 1 36124160 36124945 BWGD
Bach1g02473 1 36124160 36124945 Bach8g02758 8 34265394 34266353 ECH
Bach1g02473 1 36124160 36124945 Bach9g00243 9 1761613 1762701 ECH
Bach1g02473 1 36124160 36124945 Bach1g02473 1 36124160 36124945 ECH
Bach1g02473 1 36124160 36124945 Bach13g01235 13 16687179 16688249 ECH