Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02458 ATGAGAATCAGCAGAACCCTCTTCTGTCTCTCTGGCTTTCTTACTTTTCTCCTTTCTATCATCATTGCTCAGTATATCTTACTTCCTTTCTTTACCACTAGCACTGCCATTAGTCCCCAAAATTGCTTCAACCAGCTCGGTATACTAAATAGTATTATAAAGCTAAGTGGGGCAGAATATTTCGTGTCTCTGCTATCAAGTATTGTCGGAAAACATCACCGGCGGAGGACGTATAAACACAAATGTGACACAACCAAAGGGGAGTCTGAGCTCATTTCAGAATATAATGTGAGACTCGTTTTCACAGTTGGCCAAAATGGTTGCGCTAACTTTACTAGTGTGCAAAAAGCGGTTGATGCAGTGCCTGAATCTAACCCATATAAGACTCTTATCATTATCGATTCTGGCATTTACAGGCAAGTAATGGTGCAGGAAAACAAAACAAACCTAATATTGCAAGGTCAGGGGTATCTTAACACAATTATAGAATGGAATGATACTGCCAATTCCACAGGAGGGACTGACTATAGCTACTCGGTTGGCATATTTGCTTCTAAGTTCATTGCTTACAACATAAGCTTTAAGAATTCGGCTCCTCCAGCATCCCCAGGTGAGGATGGAGCACAAGCAGTAGCATTGAGAGTTACAGGTGATCAAGTTGCATTCTATAAATGCGGGTTCTATGGTGCTCAGGACACACTAAATGATGACAATGGGAGACATTATTATAAAGAATGTTTTATCCAAGGTTCCATTGATTTCATATTTGGAAATGCTAGATCACTTTATGAGGACTGCACCATCAATTCTGTAGCAGAAGACGGGGTTGGGATTAGCGGGTCCGTTACAGCCCATGGACGGCAGACACAGAAGGAGGAAACAGGGTTTTCGTTTGTGAATTGCAGCATTGGTGGAAGTGGGAAAGTGTGGCTTGGGAGAGCTTGGAAACCATATGCCACTGTTGTCTTTTCAACGACAAATATGTCTGATGTCGTCACTTCTAAGGGATGGACCGACTGGGACGACCGCACCAGAGACCAAACTGTCTTGTTTGGGGAGTATCATTGTTTTGGAGCTGGAGCAATTAACACGTCTAGAGTATCATACGGAAAGCAATTCAGCAATAATGAAGCGGCGCCTTACATGGATATTTCATACATTGATGGAGAAGACTGGATTCTTAATCATCAAAAATAG 1197 0.4219 MRISRTLFCLSGFLTFLLSIIIAQYILLPFFTTSTAISPQNCFNQLGILNSIIKLSGAEYFVSLLSSIVGKHHRRRTYKHKCDTTKGESELISEYNVRLVFTVGQNGCANFTSVQKAVDAVPESNPYKTLIIIDSGIYRQVMVQENKTNLILQGQGYLNTIIEWNDTANSTGGTDYSYSVGIFASKFIAYNISFKNSAPPASPGEDGAQAVALRVTGDQVAFYKCGFYGAQDTLNDDNGRHYYKECFIQGSIDFIFGNARSLYEDCTINSVAEDGVGISGSVTAHGRQTQKEETGFSFVNCSIGGSGKVWLGRAWKPYATVVFSTTNMSDVVTSKGWTDWDDRTRDQTVLFGEYHCFGAGAINTSRVSYGKQFSNNEAAPYMDISYIDGEDWILNHQK 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02458 398 Pfam Pectinesterase 102 389 IPR000070 GO:0030599|GO:0042545
Bach1g02458 398 ProSitePatterns Pectinesterase signature 2. 248 257 IPR033131 -
Bach1g02458 398 Gene3D - 95 397 IPR012334 -
Bach1g02458 398 FunFam Pectinesterase 95 398 - -
Bach1g02458 398 SUPERFAMILY Pectin lyase-like 98 393 IPR011050 -
Bach1g02458 398 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 91 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02458 Bach-Chr1 36022272 36024166 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02458 103 393 Carbohydrate Esterase AT1G05310 52.027 3.12e-111 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02458 - - gmx:100802034 538.11