Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02453 ATGGGCGCCTCTCTAGCAATTGTCATATACCATCTACTCATCCAACGATTTTGCTTCAGTCGTCAGCCAATGCTAAACAGGACCAATATAATAAATTCACAAGACACTCCCTCAGCCAGAGCCCAATTGAAAAACGGGGTAGACCAGGAAATACTCAACAAAATCCCAATTCTTTCTTACTCAACGAGAAAACCTGAGATTTTTCGTTTGGACAAAAGCGAATGCGCAATTTGCTTAGCCGAATTGGAGGATGGGGAGCTCGTGCGATTGCTGCCGCCTTGTAAACATGCCTTTCACATTCCCTGTATTGATGAGTGGTTCACGGCACATTCGGACTGTCCCATCTGCCGTTCAGCCATAACCTATGAGTCGATAGCGGCATCAGATTCGGGAAACAATGGCCACGAGAGGTCCTCGCCGGTGCCTCGTCTTCAAATTGATCCTCAATTTGTTCGTGATTTGAGTGCTTCGACTTCGAGGTTTCAATCGGAAGGTGGCTTGCTGCGACATTCTGTGTCTATCACGTCGCACATGGAGAAAAGGCCGCGAGCTTTGGTGATGGGGTTGAAGAGGTCCTTGTCTATGGACCATTCATATATTGCCATTACCATACAAAAGGGAGAAGTGGAAAAGGGTTCCAGTTCTTCTGGTAAAGGGGTTGGGATCAAATACTTCAGGGCAAGATCACTGAGGCACTTTGATCACGTGTCTTGCGTGTTTGCAAGATCTTTCTCACCGTTTGGGAACAGTAGAATTGGCAGTTCATCACATCGAATTCTTCAAGCCTGA 789 0.4664 MGASLAIVIYHLLIQRFCFSRQPMLNRTNIINSQDTPSARAQLKNGVDQEILNKIPILSYSTRKPEIFRLDKSECAICLAELEDGELVRLLPPCKHAFHIPCIDEWFTAHSDCPICRSAITYESIAASDSGNNGHERSSPVPRLQIDPQFVRDLSASTSRFQSEGGLLRHSVSITSHMEKRPRALVMGLKRSLSMDHSYIAITIQKGEVEKGSSSSGKGVGIKYFRARSLRHFDHVSCVFARSFSPFGNSRIGSSSHRILQA 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02453 262 Pfam Ring finger domain 74 117 IPR001841 -
Bach1g02453 262 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 33 122 IPR013083 -
Bach1g02453 262 CDD RING-H2_EL5-like 74 117 - -
Bach1g02453 262 SMART ring_2 75 116 IPR001841 -
Bach1g02453 262 ProSiteProfiles Zinc finger RING-type profile. 75 117 IPR001841 -
Bach1g02453 262 SUPERFAMILY RING/U-box 66 122 - -
Bach1g02453 262 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 7 184 - -
Bach1g02453 262 FunFam E3 ubiquitin-protein ligase ATL6 35 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02453 Bach-Chr1 35975511 35976299 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02453 1 121 C3H Transcription Factor Family AT5G17600 34.109 2.10e-21 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02453 - - qsa:O6P43_006588 199.904