Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02448 ATGACAGAATCAGCCTCCAGTGATTCCTCCACCAATATTCCACCACCGGAGAGCAAGCCATCGGCGCCGGGACATAAAAGTTGGGCCGATGAAGCTGAGGAGGACGTTCTTGAAGAAACTAATGGGCCTTCGAGTTCAGCATCAGCGTCGTTGCTTAACGTTGACGGATTAGCTATAGATGAGAACAAAAAGGAAGCTAAGTCTTTGGATGAACCCGATGACTCCAACATCAAAGCGATTACATCTGGTGATACTCCGTATACTTCAGCGAGCACCTTTGAAGATTTAAATCTCTCTCCGGAGCTACTGAAGGGATTGTATGTTGAAATGAAGTTTCAGAAGCCTAGTAAAATACAAGCTATCAGTTTGCCAATGATATTGAGCCCACCATTTAAGGATCTGATTGCCCAGGCACACAACGGTTCTGGCAAGACAACATGTTTTGTGCTTGGGATGTTGAGTCGTGTTGATCCTAAGCAGCAGGCTCCTCAAGCACTTTGCATTTGTCCAACAAGAGAATTGGCTATTCAGAACACTGAAGTCCTTCGAAAGATGGGAAAATACACAGGGATCAGCTCAGAATGTGCCATACCAACAGATAGCAGAGATTCTATTCCGATATCAAAACGGGCCCCAATCATGGCACTAGTGGTGATTGGGACCCCTGGCACGATAAAGAAGTGGATGACATTTAAGAAACTGGGTTTAAGCAGATTAAAAATTCTTGTTTTTGATGAGGCCGATCAAATGCTTGCTGAGGATGGTTTTAGAGATGATTCCTTGAGGATAATGAAAGAAATAGAGAAGGTCAATCCTCAGTGTCAGGTTCTTCTGTTTTCTGCTACATTCAATGACACTGTTAAGAATTTTGTTTCAAGGACAGTTAAAACGGACCACAATAAACTTTTTGTGAAGAGAGAAGAGCTATCTTTAGAGGCAGTGAAGCAATACAAGGTGAACTGTATTGATGAACTCTCTAAAGTTGAAGTGATCAGAGATTATATATTTGAAATAGGAGAGAATGTGGGGCAAACTATTATATTTGTGCGTACAAGAAATAGTGCGAGGATGTTGCACAAATCTCTTGTTGATATGGGCTATGGGGTCACTTCCATACAAGGAGCTCTTGAACATGATGAGAGAGACAAGATAGTCAAGGAGTTCAGGGATGGTTTGACTCAAGTTCTTATATCAACTGATGTTCTTGCTCGAGGCTTTGATCAGCAACAGGTTAATTTGGTTATCAATTATGATCTGCCATTGAAACACACTGCTGAGTATACCCGTGAACCTGAGCCAGATTACGAGGTTTATTTGCACAGGGTTGGTAGGGCTGGACGTTTTGGTCGCAAGGGGGCTGTATTTAACCTGATATGTGGTGATAGGGATGTAATGCTCATGCAGAAGATAGAAAAGCACTTTGGCACCCAAGTAATTGAGGTCCCAGAAAAAAGTGTTGAAGCCTACAAAGCCGCTTTGAAGGAAGCTGGTTTACTTCAATGA 1503 0.4251 MTESASSDSSTNIPPPESKPSAPGHKSWADEAEEDVLEETNGPSSSASASLLNVDGLAIDENKKEAKSLDEPDDSNIKAITSGDTPYTSASTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILSPPFKDLIAQAHNGSGKTTCFVLGMLSRVDPKQQAPQALCICPTRELAIQNTEVLRKMGKYTGISSECAIPTDSRDSIPISKRAPIMALVVIGTPGTIKKWMTFKKLGLSRLKILVFDEADQMLAEDGFRDDSLRIMKEIEKVNPQCQVLLFSATFNDTVKNFVSRTVKTDHNKLFVKREELSLEAVKQYKVNCIDELSKVEVIRDYIFEIGENVGQTIIFVRTRNSARMLHKSLVDMGYGVTSIQGALEHDERDKIVKEFRDGLTQVLISTDVLARGFDQQQVNLVINYDLPLKHTAEYTREPEPDYEVYLHRVGRAGRFGRKGAVFNLICGDRDVMLMQKIEKHFGTQVIEVPEKSVEAYKAALKEAGLLQ 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02448 500 MobiDBLite consensus disorder prediction 1 15 - -
Bach1g02448 500 Pfam DEAD/DEAH box helicase 117 289 IPR011545 GO:0003676|GO:0005524
Bach1g02448 500 MobiDBLite consensus disorder prediction 1 84 - -
Bach1g02448 500 SMART helicmild6 356 449 IPR001650 -
Bach1g02448 500 SMART ultradead3 111 317 IPR014001 -
Bach1g02448 500 CDD SF2_C_DEAD 314 458 - -
Bach1g02448 500 MobiDBLite consensus disorder prediction 58 74 - -
Bach1g02448 500 Gene3D - 308 496 IPR027417 -
Bach1g02448 500 Pfam Helicase conserved C-terminal domain 330 449 IPR001650 -
Bach1g02448 500 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 468 IPR027417 -
Bach1g02448 500 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 125 301 IPR014001 -
Bach1g02448 500 CDD DEADc_DDX19_DDX25 98 302 - -
Bach1g02448 500 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 66 471 - -
Bach1g02448 500 Gene3D - 71 307 IPR027417 -
Bach1g02448 500 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 330 489 IPR001650 -
Bach1g02448 500 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 91 120 IPR014014 GO:0003724
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02448 Bach-Chr1 35948109 35952047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02448 73 482 Eukaryotic Initiation Factors Gene Family AT3G19760 35.766 1.45e-70 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02448 K18655 - qsa:O6P43_010208 772.696