Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02444 ATGTCCAACCGCGGTGGTGGTCGTGGTGGTGATGGTGGCCGGCGTGGTGGTCGTCAAGGTTGGGGCCGTGGTCGGAGCTTCTCTGGTGACTCCACGCCTTTCACACAGTCGGTTTACCAAGCTGGCTCGTCTTCTTCACATCCTGTGTCCGTGGCTCAAATCAGCAGTGACGTGGAAGAGCGACTCACGCTGCAATCTCGTACAGCACCAACGAAAACACGTCTTACTCAGCCTTCTAGACCTGTGCCTGTGTCTCTTTCCGCCTCTGCACGGCAGCAGTCAGAACCATCTCAGAAGGCAAGGTTTGTTCCAAGGCCAGGATATGGTTCGGCTGGAACTAGATGCATCATTCGTGCGAACCATTTTCTCGTTGAGCTCGCGGATAGAGCGCTGTATCATTATGATGTATCAATCACTCCAGAGGTGACCTCGCGACGGCTAAACAGGGCAGTAATGAAGGAGCTTATTTGGGCGCAAGGAAATGCGGTTTTTGGAGGTCGAAAAACTGCTTATGATGGAAGAAAAGGGTTCTATACGGCAGGACCTTTGTCCTTTACCTCTAAGGACTTTGTAGTTAGGCTGATCAAAAATGATGTCACAGGATCTACAAGGAAGGAAAGGGAGTTTAAAGTGTCACTCAAGTTTGCTTCAAAATCAGAGCCCTTTCATCTGCAGGAGTTTTTGCATGGTAGACGCCTAGATTGTCCACATGAGATCATCCAAGTTCTGGATATAGTTCTAAGGGAATCTCCTTCGAACAAGTGTACTGTCGTAGGGAGGTCTTTCTTCTCACCAATGTTAGGAGACAAACATGAGATTGGCAATGGCGTGGAAAGCTGGAAGGGATTTTACCAGAGTCTTCGCCCTACTCAAATGGGAATGTCGCTCAATATTGATGTGTCAGCTACATGTTTTTATGAACCTATACCGGTTATTGACTTCGTAAAGAAATTTCTTAATCTTCGTGATTTGTCAAGAGCGGCTTCAAGGCCTCTGTCAGACAGTGACCGGTTGAAGTTGAAGAGAGTCTTTAGAGGAGTCAAAGTGCAAGTTACTCATGGAGAGATGAAACGGTACAAGATTACTGGCATAACAGTAGCACCAACAAGTCAGCTGACATTTTCCCCTGATAAAAAAAGAGTGCAATCTGTTGCTCAGTACTTCCGTGAGAAGTACAACATCAACCTTCACTATCTCTCTTGGCCATCTCTTCAATCCGGGAACGAGTCAAAACCAATATTCTTGCCCATGGAGTGCTGTGTCATGGTTGAAGGGCAGAGATACAGCAAGAAGTTAAATGAGAAACAGGTCACTGCCATGTTAAAGGAGTCCTGTAAACGCCCTCGCGAAAGAGAAAGCAGTATTAGAGATATTTTGTTCTTCAACAACTATGGAAATGATAACTTGGCACAAGAATTTGGAGTTAGTGTGAAGAAGGAACTGGCATCCATTGATGCTAGAGTGTTGCCACCTCCACTTCTCAAATATCATGATTCTGGTAAGGAGAATGTTATAAGACCACGCGTGGGGCAGTGGAACATGATTAATGCGAAGATGTATAAAGGGGCTAAGTTGAAGTTCTGGACGTGTGCCAACTTTTCTAGTTTAAATGGACAAATAGTAGTAGATTTTTGTCGGAATCTGGTTAGCATGTGCCGCAGCAAGGGGATGGATGTCAATCCCTCACCTTTGTTTCCCGTTCAATCTGCTCATCCCAATCAAATAGAAAGAACATTGTGTGAAATTGAACGTGCTTGTAGCAAGGAGGGAAAACAGCTTCAGCTATTAATTATAATTCTTCCTGACATCAGTGAATCATATGGAAGAATTAAGAGATTATGTGAAACTGAGCTAGGTATAGTTTCCCAGTGCTGTCAACCCAAGCAAGCAAGAAGGTGTAACGCACAGTATCTAGAAAATGTTGCCTTGAAGATCAATGTTAAGGTCTTTTTCATTTTAACCCATCCTCCTTCTCCTTTATTTTTTGTCTTCTATTTTTACTTTTGTTCAAGCTGCTTCCAGGCAGGGGGGCAAAACACTGTCTTAGAGGATGCTGCCAATTTTAGGATACCATTTTTGACGGACGATCCTACAATCATTTTTGGGGCAGATGTTACACATCCCCAACCAGGGGAAGACTCTAGTCCTTCTATAGCAGCGGTTGTTGCATCCATGGACTGGCCAACAGCAACCACGTACAAGGGCTTAGTTTCTGCTCAGCAACACCGAGAAGAAATCATACAAGACCTTTATAAAGTAGATGGAGATCCTGAGCGTGGGGAAGTTAGACCTGCTGGGATGTTGAGGGAACTTTTGATTGCATTCCAAAGATCAACAGGCAAAAAACCAAAGAGGATCATCTTCTTTAGAGACGGTGTAAGTGAGGGACAATTCAGCAAAGTCCTACTTTGGGAATTGGATGCTATTCGGAAGGCCTGTGTGTCTTTGGAGGAGGGATATCTGCCTTTCGTTACCTTCATTGTTGTTCAGAAGAGGCATCACACACGCTTCCTCCCCACTAATCCCAACCAAACAGACAAGAGTGGAAACATCTTACCTGGAACGGTAGTCGATACTAAGATCTGCCACCCACTAGAGTTTGATTTCTATCTTTGCAGCCATGCTGGGATTCAGGGTACTAGTCGGCCTGTCCACTATCATGTGCTATATGACGAAAATGGATTCTCTGCTGATGCTTTGCAAACACTCACCAACAGCCTTTGTTACACGAATGCAAGATGCACTAGGTCTGTTTCTGTAGGTGTACTTGTAATTGCAGTGCCTCCGGCATACTATGCGCATCTGGCTGCATTCCGAGCTAGGTACTACGTTGAGGGAGATGGTCCCTCGGAGAGTGAATCTAGCACAGGGCGGGGTGGTTCGAGAAGGGAAGCTGGCCCCATTACGTCTCTCCCTGAAATTAAAGCTAATGTGAAAAATGTCATGTTCTATTGTTGA 2958 0.452 MSNRGGGRGGDGGRRGGRQGWGRGRSFSGDSTPFTQSVYQAGSSSSHPVSVAQISSDVEERLTLQSRTAPTKTRLTQPSRPVPVSLSASARQQSEPSQKARFVPRPGYGSAGTRCIIRANHFLVELADRALYHYDVSITPEVTSRRLNRAVMKELIWAQGNAVFGGRKTAYDGRKGFYTAGPLSFTSKDFVVRLIKNDVTGSTRKEREFKVSLKFASKSEPFHLQEFLHGRRLDCPHEIIQVLDIVLRESPSNKCTVVGRSFFSPMLGDKHEIGNGVESWKGFYQSLRPTQMGMSLNIDVSATCFYEPIPVIDFVKKFLNLRDLSRAASRPLSDSDRLKLKRVFRGVKVQVTHGEMKRYKITGITVAPTSQLTFSPDKKRVQSVAQYFREKYNINLHYLSWPSLQSGNESKPIFLPMECCVMVEGQRYSKKLNEKQVTAMLKESCKRPRERESSIRDILFFNNYGNDNLAQEFGVSVKKELASIDARVLPPPLLKYHDSGKENVIRPRVGQWNMINAKMYKGAKLKFWTCANFSSLNGQIVVDFCRNLVSMCRSKGMDVNPSPLFPVQSAHPNQIERTLCEIERACSKEGKQLQLLIIILPDISESYGRIKRLCETELGIVSQCCQPKQARRCNAQYLENVALKINVKVFFILTHPPSPLFFVFYFYFCSSCFQAGGQNTVLEDAANFRIPFLTDDPTIIFGADVTHPQPGEDSSPSIAAVVASMDWPTATTYKGLVSAQQHREEIIQDLYKVDGDPERGEVRPAGMLRELLIAFQRSTGKKPKRIIFFRDGVSEGQFSKVLLWELDAIRKACVSLEEGYLPFVTFIVVQKRHHTRFLPTNPNQTDKSGNILPGTVVDTKICHPLEFDFYLCSHAGIQGTSRPVHYHVLYDENGFSADALQTLTNSLCYTNARCTRSVSVGVLVIAVPPAYYAHLAAFRARYYVEGDGPSESESSTGRGGSRREAGPITSLPEIKANVKNVMFYC 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02444 985 Gene3D - 690 985 IPR036397 GO:0003676
Bach1g02444 985 SMART PAZ_2_a_3 316 446 IPR003100 GO:0005515
Bach1g02444 985 SMART DUF1785_2 256 308 IPR014811 -
Bach1g02444 985 Pfam PAZ domain 339 441 IPR003100 GO:0005515
Bach1g02444 985 CDD PAZ_argonaute_like 308 423 - -
Bach1g02444 985 Pfam Piwi domain 596 649 IPR003165 GO:0003676
Bach1g02444 985 Pfam Piwi domain 676 944 IPR003165 GO:0003676
Bach1g02444 985 Gene3D paz domain 302 428 - -
Bach1g02444 985 MobiDBLite consensus disorder prediction 1 105 - -
Bach1g02444 985 FunFam protein argonaute 10-like 689 985 - -
Bach1g02444 985 SUPERFAMILY PAZ domain 303 464 IPR036085 GO:0005515
Bach1g02444 985 ProSiteProfiles PAZ domain profile. 309 424 IPR003100 GO:0005515
Bach1g02444 985 FunFam Argonaute 10 488 655 - -
Bach1g02444 985 MobiDBLite consensus disorder prediction 25 99 - -
Bach1g02444 985 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 95 946 - -
Bach1g02444 985 MobiDBLite consensus disorder prediction 948 967 - -
Bach1g02444 985 Gene3D - 488 650 - -
Bach1g02444 985 ProSiteProfiles Piwi domain profile. 595 945 IPR003165 GO:0003676
Bach1g02444 985 SUPERFAMILY Ribonuclease H-like 591 946 IPR012337 -
Bach1g02444 985 CDD Piwi_ago-like 470 943 IPR045246 -
Bach1g02444 985 SMART Piwi_a_2 595 945 IPR003165 GO:0003676
Bach1g02444 985 Pfam Argonaute linker 1 domain 258 307 IPR014811 -
Bach1g02444 985 Pfam N-terminal domain of argonaute 114 247 IPR032474 -
Bach1g02444 985 Pfam Argonaute linker 2 domain 450 496 IPR032472 -
Bach1g02444 985 Pfam Mid domain of argonaute 507 580 IPR032473 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02444 Bach-Chr1 35919260 35925718 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02444 68 985 Eukaryotic Initiation Factors Gene Family AT1G48410 55.068 0.0 1017
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02444 K11593 - qsa:O6P43_006580 1306.58