Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02435 ATGGATTGGAATGGGAGCATAAGATCCTTTGTTCCTCGAGGAGAGTCTTCCTTAAGTTTCCTCTACAACTATAACTACAGCCCATATCCAGGAATGGAAGTGAAACGTTCAGCACTAGCAGAGACACCACAAGGGTTGATTCAGTCAGTGGACAAAATGAACTACGGAAGCCAGGAGAAAAAGAAGCGATTAACAGTCGATCAACTTGACTCGCTGGAGAGGAGTTTCCAGGAGGAGATAAAGTTGGACCCCGATAGGAAGATGAAGCTTTCCCGGGACCTGGGGCTCCACCCTCGCCAAATTGCAGTTTGGTTCCAAAATAGGCGTGCAAGGTGGAAGGCTAAGCAGCTTGAGAACTTGTACGATGCACTCAAACAGGAATTCGACATCATCTCCAAGGAAAACCAGAAGCTTCAAGAAGAGGTAATAAAGTTGAGGGCTGTGCTGAGAGAGCAAGCTGGTAGAACGCAGGCATCTGCAGGTTATACAGAAATCTCTGGGGAAGAAACAGTAGAAAGCACGTCAGAGGCCATCCGTAGCTCTAACAAGCAGATTGCTGAGGGCAACTATTCTTTCACTGGGGATGATTATAACACTGTTTCACTGCCCTACTGGGCTGTTGTGCCTCAATATTATCCCTAA 642 0.4688 MDWNGSIRSFVPRGESSLSFLYNYNYSPYPGMEVKRSALAETPQGLIQSVDKMNYGSQEKKKRLTVDQLDSLERSFQEEIKLDPDRKMKLSRDLGLHPRQIAVWFQNRRARWKAKQLENLYDALKQEFDIISKENQKLQEEVIKLRAVLREQAGRTQASAGYTEISGEETVESTSEAIRSSNKQIAEGNYSFTGDDYNTVSLPYWAVVPQYYP 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02435 213 ProSiteProfiles 'Homeobox' domain profile. 55 115 IPR001356 GO:0003677
Bach1g02435 213 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 51 177 IPR045224 GO:0003700
Bach1g02435 213 CDD homeodomain 60 116 IPR001356 GO:0003677
Bach1g02435 213 Pfam Homeodomain 60 113 IPR001356 GO:0003677
Bach1g02435 213 FunFam Putative homeobox-leucine zipper protein ATHB-51 57 120 - -
Bach1g02435 213 ProSitePatterns 'Homeobox' domain signature. 90 113 IPR017970 GO:0000981|GO:0006355
Bach1g02435 213 SMART HOX_1 58 119 IPR001356 GO:0003677
Bach1g02435 213 Coils Coil 107 155 - -
Bach1g02435 213 Pfam Homeobox associated leucine zipper 115 149 IPR003106 GO:0006355|GO:0043565
Bach1g02435 213 Gene3D - 51 128 - -
Bach1g02435 213 SUPERFAMILY Homeodomain-like 52 117 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02435 Bach-Chr1 35855066 35856471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02435 16 145 Homeobox Transcription Factor Family AT5G03790 55.072 1.58e-43 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bach1g02435 Homeodomain 1.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02435 - - rcu:8274879 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00887 8 5856200 5857666 Bach1g02435 1 35855066 35856471 BWGD
Bach1g02435 1 35855066 35856471 Bach1g02435 1 35855066 35856471 ECH