Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02416 ATGGACATGGAGAGCTCACGTAGATCGTTTGATAGATCGAGGGAAGCAGGTATAAAGAAACCCCGATTAACAGACGAACTCGAGCGCGTCCCAAATTCCAGTATCCGACAGTTTCCTCAGCGACAAGTGGCTTCTGGGGTTAATACGTTTGCTTCAGCAAGGTTTAGAACGAATGATAGAGAATCTGAAAGCAATGACTCGGGTCGTGGTGGATACCAGCCTCAGCAGCCCCTTCATCAAGAGCTTGTAACTCAGTATAAAACTGCACTAGCTGAGCTGACTTTCAATTCGAAGCCCATAATTACCAACTTGACTATCATTGCAGGCGAGAACCTTTATGCAGCAAAGGCAATTGCCGCCACTGTCTGTGCTAACATTATAGAGGTTCCTAGCGAACAAAAGCTGCCATCTCTTTATCTTTTAGACAGTATTGTTAAGAATATCGGGCGGGATTATATAAAATATTTTGCTGCCAGACTACCTGAGGTATTCTGCAAGGCATATAGACATGTTGATTCTTCAGTCCATCAAAGTATGAGGCATCTTTTTGGAACATGGAAAGGAGTCTTTCCTCCTCCAACCCTTCAGATGATTGAGAAAGAGCTTGGCTTTACTTCTGCAGTCAACGGTTCATCCTCTTCATCTACTATGAGGAGCAATTCACCATCACAACGTCCACCTCATAGTATCCATGTTAATCCCAAGTATTTAGAAAGACAGCGACTTCAGCAGTCCACCAGGACTAAAGGGATAGCTAATGATACGACGGGAGCTATTGCAAACTCAACTGAGGATGCAGAGAGGCCAAATAGAGCTTTGGGTGGTGGACGGCCTTGGGCAGATCCCTCTGTTAACATGCATAACATTCAGCAGTCTCATAGAGATGCATTTAATGATTCCGTTCATGAAAAGAGCACCGGTGCATCCTATGTAGGCAATGAATATAATTCTGATCTGTCTAGGAATTTTGGCTTGGGTGTTGGAAGAACTGGTGGTAGGATCTCTGAGTCAGGACATGACAAAGCTCGGTACAAAGCTGCTGCTGGTGGTTTTGCAGACACAGTAGCTGGCCAAAGAAATGGTTTCAATGTTAAGCATGGCCTTTTGAATCACGAAGGTCCTAAGTCCATGAATTTGGATGCAAACCATCAGACAGCACAAAGCTTAACTAGCCTAAGAAGCAATGTGGTGTCAAGTAACTGGAAGAATTCTGAGGAAGAGGAGTTCATGTGGGATGGTATGAACTCTGGATTGACTGATCGTGGTGCATCTAATGTCCCTAGCAGCTTGAGCAAAGATCATTGGACAGCTAATGATGAAAATTTGGCAGTTGAAGATCACCTCCCAATCCCTCACCATTTTGGGGCAAAGGTTGATCGAGAAACATCCACGGAATCTCTTTCGACTGAAAAGAAACAACTACCTACTTTTGGTCACCATCCATCATTATCATGGCAACTGCAGGAGCAGCACTCAATTGACGAGCTAGATCGTAGGCAAGGTCGCACAGAAGACTATGTATCCAGTCTCAGTGATTTGCCAACCAATTCTTTGGTCAGGAAGGGGAATCCACCTTTCCTGCCAAATGCAACCACAGGATCAGCAGGAATGGTGGGACCACAGCAATTTTCTGTTAGAGCTGGTTCCCCTTCTGGGCAGTCATCTTTGAGACAACAATCTCCATCACCTACAGTACCTCTGCGCCATCCAAGTAATCAATTGCAAAACATGGCTGAGCAAGACCACTCACAGACTCTTAAAACATCCCAATTTTCGGGGAGCCTGCAAAGCAAATATCTTAGAGATTCATTACCTGCTCCTCCTCCTAATGTTCAAGTCAGTAACATGCGAAGGTCACAGCTAAAGGATCCACGAGGTCCTTTATCTTCAGTGACTTCTTTACCGCAAAGACACCAGAGTGCAGTTTCACAGCAGCAGCAACTGGGCTCCTTTGAGATTGAAGTTTCTGATAAGACAGAGAAGCAACCCCAGTCTGAAGTTACTTTAGCTGCAGAAACTTCAGAACCGTCAACCACAAGTAGTTTGTTAGCTGCAGTGATGAAGAGTGGGATTTTCTCGAACAATTCAATTACCAGTAGTCTACCTAATTTAAGTTTCCTGGATACAAAGAACCTGCCATTGCAATCAGGGGTTCAGCCTTCCCGGCCTGCTGGGTCTTCTACCTCATTAATTTCTTCTAGCCTTGAGGATGCATCACCATCTTCTTTAGGTCCTTCTCCCAATGATGAGTCATCTACTCTGCCAGATGTATCTCAAGGAAAGGTTGGACAACCACCAAGGCCACCTCCTCAACGACCAGTTTCCTCTATTGTGAGTAGTGCCTCAGCTCGGACCTCAAATGTCACCCATAGTAACTCAAATCCAATTTCAAACCTATTAAGCTCCTTAGTTGCGAAGGGGTTGATATCTGCTAAAACAGGGTCCCCTACTAGGGAGCCAGCTGAGATGCAGACACGATTGGAGGACCAAAGTCAGAGCATTACCATCAGTAACTCCTTGCCAGTCGCTTCTGTTACTGGTCCGGCAGCCATCCCTGCATTATCTACAAGGGATGATCTGGACCATAGTGCCAAAAGCCCTGTAGCTATATCTCAATCAACTGCCACAGAAATAAGAAATCTTATTGGTTTTGTGTTTAAGCCTGATTTAATCCGAGAATTGCATCCAGATGTAATCAGAGATCTACTTGATGATCTTCCACATCGTTGCAGTGTTTGTGGCCTAAGGCTTAAACATCAAGAACAGTTTAATAGACATTTGGAGTGGCATGCTACAAGAGAAGGAGAACAAAATGGTCTAATCAAAGCATCAAGAGGATGGTATGCAAAATCAAGTGATTGGATTGGCATCAATGAGGTTGAATTCCCATCTGAGTCTGAGCATGCTGATTCTGTAGACATATATTCTAAGACAAGAGACAACATTGAACAGGATGAGATGGTTCCAACTGATGAAAACCAGTGCTTGTGTGTATTGTGCGGTGAGATTTTTGAAGATGTTTACTGTCAAGAAAAGGATGAGTGGATGTTCAAAGGCGCTGCTTACATGACTATCTCAGATAGCAATGATGAGATTGGAAGTGGTCCAATCATTCATGCGAAATGCTTATCAAGGTGCTCCATACCAAGCGTTGCTGAAATGGAATAG 3168 0.4426 MDMESSRRSFDRSREAGIKKPRLTDELERVPNSSIRQFPQRQVASGVNTFASARFRTNDRESESNDSGRGGYQPQQPLHQELVTQYKTALAELTFNSKPIITNLTIIAGENLYAAKAIAATVCANIIEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRHVDSSVHQSMRHLFGTWKGVFPPPTLQMIEKELGFTSAVNGSSSSSTMRSNSPSQRPPHSIHVNPKYLERQRLQQSTRTKGIANDTTGAIANSTEDAERPNRALGGGRPWADPSVNMHNIQQSHRDAFNDSVHEKSTGASYVGNEYNSDLSRNFGLGVGRTGGRISESGHDKARYKAAAGGFADTVAGQRNGFNVKHGLLNHEGPKSMNLDANHQTAQSLTSLRSNVVSSNWKNSEEEEFMWDGMNSGLTDRGASNVPSSLSKDHWTANDENLAVEDHLPIPHHFGAKVDRETSTESLSTEKKQLPTFGHHPSLSWQLQEQHSIDELDRRQGRTEDYVSSLSDLPTNSLVRKGNPPFLPNATTGSAGMVGPQQFSVRAGSPSGQSSLRQQSPSPTVPLRHPSNQLQNMAEQDHSQTLKTSQFSGSLQSKYLRDSLPAPPPNVQVSNMRRSQLKDPRGPLSSVTSLPQRHQSAVSQQQQLGSFEIEVSDKTEKQPQSEVTLAAETSEPSTTSSLLAAVMKSGIFSNNSITSSLPNLSFLDTKNLPLQSGVQPSRPAGSSTSLISSSLEDASPSSLGPSPNDESSTLPDVSQGKVGQPPRPPPQRPVSSIVSSASARTSNVTHSNSNPISNLLSSLVAKGLISAKTGSPTREPAEMQTRLEDQSQSITISNSLPVASVTGPAAIPALSTRDDLDHSAKSPVAISQSTATEIRNLIGFVFKPDLIRELHPDVIRDLLDDLPHRCSVCGLRLKHQEQFNRHLEWHATREGEQNGLIKASRGWYAKSSDWIGINEVEFPSESEHADSVDIYSKTRDNIEQDEMVPTDENQCLCVLCGEIFEDVYCQEKDEWMFKGAAYMTISDSNDEIGSGPIIHAKCLSRCSIPSVAEME 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02416 1055 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 45 1046 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Bach1g02416 1055 MobiDBLite consensus disorder prediction 716 759 - -
Bach1g02416 1055 MobiDBLite consensus disorder prediction 774 796 - -
Bach1g02416 1055 MobiDBLite consensus disorder prediction 527 599 - -
Bach1g02416 1055 MobiDBLite consensus disorder prediction 468 490 - -
Bach1g02416 1055 MobiDBLite consensus disorder prediction 1 29 - -
Bach1g02416 1055 MobiDBLite consensus disorder prediction 491 505 - -
Bach1g02416 1055 MobiDBLite consensus disorder prediction 207 281 - -
Bach1g02416 1055 ProSiteProfiles CID domain profile. 78 206 IPR006569 -
Bach1g02416 1055 MobiDBLite consensus disorder prediction 1 76 - -
Bach1g02416 1055 MobiDBLite consensus disorder prediction 456 679 - -
Bach1g02416 1055 FunFam polyadenylation and cleavage factor homolog 4 75 203 - -
Bach1g02416 1055 Gene3D - 73 203 IPR008942 -
Bach1g02416 1055 CDD CID_Pcf11 83 195 IPR047415 -
Bach1g02416 1055 SMART 558neu5 81 203 IPR006569 -
Bach1g02416 1055 MobiDBLite consensus disorder prediction 238 263 - -
Bach1g02416 1055 SUPERFAMILY ENTH/VHS domain 80 200 IPR008942 -
Bach1g02416 1055 MobiDBLite consensus disorder prediction 207 228 - -
Bach1g02416 1055 ProSitePatterns Zinc finger C2H2 type domain signature. 910 930 IPR013087 -
Bach1g02416 1055 MobiDBLite consensus disorder prediction 608 653 - -
Bach1g02416 1055 Pfam CID domain 87 196 IPR006569 -
Bach1g02416 1055 MobiDBLite consensus disorder prediction 662 679 - -
Bach1g02416 1055 MobiDBLite consensus disorder prediction 716 796 - -
Bach1g02416 1055 MobiDBLite consensus disorder prediction 30 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02416 Bach-Chr1 35702976 35709432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02416 54 418 C2H2 Transcription Factor Family AT4G04885 38.606 6.89e-58 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach1g02416 CID 1.4e-13 CL0020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02416 K14400 - gmx:100788958 1088.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00906 8 5991879 5999365 Bach1g02416 1 35702976 35709432 BWGD
Bach1g02416 1 35702976 35709432 Bach1g02416 1 35702976 35709432 ECH