Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02410 ATGGGTTCCAATTCTCATTCTACTTCCTCTGCAGGTAGCAGCAGAAGCTCTGCTGCAGGGACTGGGCGGCACCCAGAGTACCGTGGGGTAAGACGTAGGAGTAGTGGGAAATGGGTGTCTGAAATCAGGGAGCCTAGGAAGCCTAACAGGATATGGTTAGGCACATTCCCTACACCAGAAATGGCTGCTGTTGCCTATGATGTGGCTGCTCTTGCTCTTAAGGGTAAGGATGCTGACCTCAACTTTCCTAACTCTGCGTCTTCTCTTCCTGTCCCTGCTTCTTCTTCTGCCCGTGATATTCAGATGGCTGCAGCTAGTGCTGCTGCTGCTGTTGGTGCAGCCAAAGATGCTTTATCAGGGTTTGAGGGAAATGGAGCAGGGAATTATAACGACTCAGTGCCACAAGACATAGCAGGAGTGGCCGAGTTTGTCGATGAGGATTTGATCTTTGATATGCCAAATGTTCTAATGAATATGGCAGAGGGAATGCTTTTGAGCCCTCCTCATTGGGACATTGCTGGAGACGCTGCTGCCCAAGAATACATTAATTTTGAGGATCCAAACCTTTGGAAATTTTAA 579 0.4853 MGSNSHSTSSAGSSRSSAAGTGRHPEYRGVRRRSSGKWVSEIREPRKPNRIWLGTFPTPEMAAVAYDVAALALKGKDADLNFPNSASSLPVPASSSARDIQMAAASAAAAVGAAKDALSGFEGNGAGNYNDSVPQDIAGVAEFVDEDLIFDMPNVLMNMAEGMLLSPPHWDIAGDAAAQEYINFEDPNLWKF 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02410 192 PRINTS Ethylene responsive element binding protein signature 27 38 IPR001471 GO:0003700|GO:0006355
Bach1g02410 192 PRINTS Ethylene responsive element binding protein signature 49 65 IPR001471 GO:0003700|GO:0006355
Bach1g02410 192 MobiDBLite consensus disorder prediction 1 20 - -
Bach1g02410 192 MobiDBLite consensus disorder prediction 25 41 - -
Bach1g02410 192 FunFam Ethylene-responsive transcription factor 2 26 84 - -
Bach1g02410 192 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 21 190 IPR045277 GO:0003700
Bach1g02410 192 CDD AP2 27 85 IPR001471 GO:0003700|GO:0006355
Bach1g02410 192 SMART rav1_2 26 89 IPR001471 GO:0003700|GO:0006355
Bach1g02410 192 SUPERFAMILY DNA-binding domain 26 85 IPR016177 GO:0003677
Bach1g02410 192 ProSiteProfiles AP2/ERF domain profile. 26 83 IPR001471 GO:0003700|GO:0006355
Bach1g02410 192 Pfam AP2 domain 25 75 IPR001471 GO:0003700|GO:0006355
Bach1g02410 192 MobiDBLite consensus disorder prediction 1 41 - -
Bach1g02410 192 Gene3D AP2/ERF domain 26 84 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02410 Bach-Chr1 35666221 35666799 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02410 16 192 AP2-EREBP Transcription Factor Family AT2G36450 62.088 2.39e-54 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach1g02410 AP2 3.5e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02410 - - gmx:100799620 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g02410 1 35666221 35666799 Bach1g02410 1 35666221 35666799 ECH