Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02340 ATGTCTATAAACCAGTTCTCTTTGGACATTCCAGAGACGACACCGTGGTGGACTGCTACTCAGCAGCAGCACCAAACCTTACCCTTACCCTTGCCCAACCTAATGGAACCAATCCAAAACCAAAACCCATCCACTTCTGGACCACCCATTTACCCTTCTTCTTGGTCCTCTCAGCTCTACCACCACCAACAGACCAGCTCCAGTTGGCTCAATTCTCACTCGCTGAATTCCATTTCCATGTACCCCACCAATACACACAATAACAACAACATCTCCTCGTCTTCCCGTTTCAACCTTAATCAAGACGAAGACGACGATGAAGATGACGACAACGCAGTACAAGCAGTTGACGTTAACATTGATGACCAACCAAGCTCCCTAGACAAGCAAGAGCACCTTGAAAATGAGAAGGAACCCATGTTTGAGAAGCCATTGACGCCCAGCGACGTTGGCAAGCTGAACCGCCTCGTCATCCCTAAACAGCACGCCGAGAAGTACTTCCCACTGGGCGCTGCCGGTGACTCGGGCGAGAGTAGGGGATTACTACTGAGTTTCGAGGACGAATCCGGCAAGTGCTGGCGATTCCGCTATTCCTATTGGAACAGCAGCCAGAGTTATGTCTTAACCAAAGGCTGGAGCCGTTACGTGAAGGAGAAGCGTCTAGATGCTGGCGACGTCGTTTTGTTCGAGCGCCACCGCCTCGATTCCCAACGCCTTTTTATCAATTGGAGGCGCCGCCAACAAAGTGGTACCGCGCCGGCGCACGTTAGCCGAGCGGCGAGCGGGGATAGCAACAATGGTGTGGGCTTGGGCGTGGGTGCGGGGTGGACTAGAGCCTTCTATTCTGCGCATCCTTATCCTACGCATCAGCCCTTGCCATACCAACCTGACTGTCTTCATGCAGGTAGAGGGTCCCAAAGCCATGTTGAATGCCAAACGACGTCGCCGGCGGGAAACAGCTCCAGGGTTCTGAGGCTGTTCGGGGTGAACATGGAATGCCAAGAACCCGATGAATCTGCATCCGGATCCTCAAGACCCGAATGTTCGTACATGTCATCAACCCAGGGCACACCTACCCATCACTTCTACCATCATCAAGCTTCTTATTCCCCCAACACTCACTCTCACATGGTACGTCAACTACCATTTTGCTAG 1155 0.5247 MSINQFSLDIPETTPWWTATQQQHQTLPLPLPNLMEPIQNQNPSTSGPPIYPSSWSSQLYHHQQTSSSWLNSHSLNSISMYPTNTHNNNNISSSSRFNLNQDEDDDEDDDNAVQAVDVNIDDQPSSLDKQEHLENEKEPMFEKPLTPSDVGKLNRLVIPKQHAEKYFPLGAAGDSGESRGLLLSFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKEKRLDAGDVVLFERHRLDSQRLFINWRRRQQSGTAPAHVSRAASGDSNNGVGLGVGAGWTRAFYSAHPYPTHQPLPYQPDCLHAGRGSQSHVECQTTSPAGNSSRVLRLFGVNMECQEPDESASGSSRPECSYMSSTQGTPTHHFYHHQASYSPNTHSHMVRQLPFC 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02340 384 MobiDBLite consensus disorder prediction 86 110 - -
Bach1g02340 384 MobiDBLite consensus disorder prediction 335 354 - -
Bach1g02340 384 MobiDBLite consensus disorder prediction 336 354 - -
Bach1g02340 384 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 83 344 IPR044800 GO:0003700
Bach1g02340 384 Gene3D - 130 256 IPR015300 -
Bach1g02340 384 Pfam B3 DNA binding domain 141 247 IPR003340 GO:0003677
Bach1g02340 384 FunFam B3 domain-containing protein 134 256 - -
Bach1g02340 384 SUPERFAMILY DNA-binding pseudobarrel domain 136 248 IPR015300 -
Bach1g02340 384 MobiDBLite consensus disorder prediction 30 56 - -
Bach1g02340 384 CDD B3_DNA 139 237 IPR003340 GO:0003677
Bach1g02340 384 SMART B3_2 141 247 IPR003340 GO:0003677
Bach1g02340 384 ProSiteProfiles B3 DNA-binding domain profile. 141 247 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02340 Bach-Chr1 35232408 35234163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02340 134 334 RAV Transcription Factor Family AT5G06250 52.857 4.79e-67 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bach1g02340 B3 6.8e-29 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02340 K09287 - qsu:111990568 335.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00973 8 6469521 6471035 Bach1g02340 1 35232408 35234163 BWGD
Bach1g02340 1 35232408 35234163 Bach1g02340 1 35232408 35234163 ECH