LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach1g02324	ATGTCCGGCGGCGCTGGAGCTTCGAACCGCCAGGCGTCGCCATCGCTGGAAGCATCGAGCCTCCAGACACGGCCGCCACTGAAGCGTCATCTTGCGTTTGCATTTACAAAGCCTCCATTTGTTCCTCCAGATGATTATCACAACTTTTCTGCTGCAGACTCTAAGAGACCTGCTGATCAAGAAGCTGAAGCTATTGTTGTTAGATCTCCTTACATGAAGAGGAAGGGTGGAGTAAATGACAATGATGGTGAGTCACAGGAGTGGAGTAACACCCTTGGATACTCGAATGTAATGAGTAGTCCTTTCAAAACACCTGTGTCTGCAAAAGGGGGAAGGACATACAGTAAATCAAAGGTTTCCAAGGAGGGCAAATCTGGTCCTCAGACACCCATCTCAAATGCTGGTTCGCCTTCTCCTCTTACTCCTGCTGGCAGTTGTCGTTATGACAGTTCCTTAGGTCTCTTGACAAAAAAGTTCATCAATTTGCTCAAGCATGCAGAGGATGGTAATCTTGACCTAAATAAAGCGGCAGAAACTTTGGAGGTGCAAAAGAGAAGGATATATGACATTACTAATGTCTTGGAAGGCATTGGTCTCATCGAGAAAAAGCTCAAGAATAGAATACACTGGAAGGGACTTGATTCGTCAACGTCTGGAGAGATGGATGGTGATGTCTCTATGCTAAAGGCAGAAGTTGAGAAACTCTCCTTGGAAGAGTGCAGATTAGATGATCAAATAAGGGAAATGCAGGAAAGGCTGAGGAGTTTGAGTGAAGATGAAAACAACCAAAAGTGGCTTTTTGTAACTGAAGAAGATATTAAGGGCATACCCTGCTTAAAGAATGAAACGCTGATAGCAATTAAAGCCCCACATGGAACCACCCTGGAAGTCCCTGATCCTGAGGAAGCTGTTGATTATCCACAGAGGAGATATAGAGTAATTCTTAGAAGCACAATGGGTCCTATTGATGTGTACCTCGTCAGTCAATTTGAGGAGAAATTTGAAGAGATGAACAGTGTTGAACCGCCCATGAGCTTCCCACTGGTATCAAGTTCAGGGTCTAATGAACACCTAACAACAGAAATGGTTCCTGTTGAATATAATGGAAAGGGACCTGATCCTCAATCTCAACTCCCTTCTCATACATGCAATGATCTAAATGCTTCACAAGAGCTAGCTGGGGGAATGATGAAGATTGTTCCTTCAGATGTTGATAATGATGCTGATTATTGGCTATTATCAGACGCTGATTCGTATATGTGTATTCTTGACTCCAAGAAAACAGCTAGCGTTGATTGGAATGGGGTGGATATGCTTCATCCGGACTTCGGAATCATCTCAAGGCCGCAAACTCCATCTGGATTTTCTGAAGCGCCATCCACTGTAGCTAATTCTACTGAGAGGTGA	1407	0.4421	MSGGAGASNRQASPSLEASSLQTRPPLKRHLAFAFTKPPFVPPDDYHNFSAADSKRPADQEAEAIVVRSPYMKRKGGVNDNDGESQEWSNTLGYSNVMSSPFKTPVSAKGGRTYSKSKVSKEGKSGPQTPISNAGSPSPLTPAGSCRYDSSLGLLTKKFINLLKHAEDGNLDLNKAAETLEVQKRRIYDITNVLEGIGLIEKKLKNRIHWKGLDSSTSGEMDGDVSMLKAEVEKLSLEECRLDDQIREMQERLRSLSEDENNQKWLFVTEEDIKGIPCLKNETLIAIKAPHGTTLEVPDPEEAVDYPQRRYRVILRSTMGPIDVYLVSQFEEKFEEMNSVEPPMSFPLVSSSGSNEHLTTEMVPVEYNGKGPDPQSQLPSHTCNDLNASQELAGGMMKIVPSDVDNDADYWLLSDADSYMCILDSKKTASVDWNGVDMLHPDFGIISRPQTPSGFSEAPSTVANSTER	468

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach1g02324	468	FunFam	E2F transcription factor 1	141	214	-	-
	Bach1g02324	468	SUPERFAMILY	"Winged helix" DNA-binding domain	147	210	IPR036390	-
	Bach1g02324	468	MobiDBLite	consensus disorder prediction	1	22	-	-
	Bach1g02324	468	Gene3D	-	141	214	IPR036388	-
	Bach1g02324	468	Pfam	E2F/DP family winged-helix DNA-binding domain	149	212	IPR003316	GO:0005667\|GO:0006355
	Bach1g02324	468	MobiDBLite	consensus disorder prediction	82	103	-	-
	Bach1g02324	468	Pfam	E2F transcription factor CC-MB domain	228	328	IPR032198	GO:0046983
	Bach1g02324	468	MobiDBLite	consensus disorder prediction	1	142	-	-
	Bach1g02324	468	SUPERFAMILY	E2F-DP heterodimerization region	225	329	IPR037241	-
	Bach1g02324	468	CDD	E2F_DD	228	329	IPR032198	GO:0046983
	Bach1g02324	468	Gene3D	-	219	329	-	-
	Bach1g02324	468	PANTHER	TRANSCRIPTION FACTOR E2F	86	417	IPR015633	GO:0000978\|GO:0006357
	Bach1g02324	468	MobiDBLite	consensus disorder prediction	449	468	-	-
	Bach1g02324	468	MobiDBLite	consensus disorder prediction	446	468	-	-
	Bach1g02324	468	SMART	E2F_TDP_2	147	212	IPR003316	GO:0005667\|GO:0006355
	Bach1g02324	468	MobiDBLite	consensus disorder prediction	110	142	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach1g02324	Bach-Chr1	35128807	35133221	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach1g02324	25	468	E2F-DP Transcription Factor Family	AT2G36010	56.077	9.65e-163	467

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	E2F-DP	Bach1g02324		E2F_CC-MB	4.4e-34	No_clan