Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02309 ATGGCGACGTACTTTCATGGTAATTCAGAAATCCAAGCACCCGATGGACTCCAAACACTTGTCCTAATGAACCCTGGTTTCATCCAGTACTCGGACACTCCTCCGCCGCAGCCGCCACCGCATGCCAGCAACCTAGTCTTCCTCAATTCTGCCGCCACTATTGCAGCCAACAACTCTCTCACTCCCCAAAGCCTCCAACACGCGCCACCCACTCACACTCAACAATTCGTGGGTATCCCTCTTCCCACCACCGCCTCCCAGGATCCTAACCACCAATCCATGCATGCCCACCACGATGTCTCCGCCTTGCATGGATTCGTGCCTCGCATGCAGTATAGTCTCTGGAACACAATTGACCCCAACGCGGCGGCGCGTGACACTCCACGCGCACAGCAGGGATTGTCCCTTAGCCTTTCCTCGCAGCAAGCGGGGATGGGATCTTTCCGGGTTGATCGCGACGTGGCATCGCAGGGTCAAGCACCTGCTCTTTCCGGAGAAGATGCACGCGTGCCGGGTGGGTCATCTTCTTCGGCTTCTGGGGTTACAAATGGGGCTTCAGGCATTCAGAGTGTGCTTCTGAGTTCCAAGTACTTGAAGGCAGCACAGGAACTTCTAGACGAGGTCGTCAACGTTAACAATGGGATTAAGACTGAATTGGCGAAGAAGGCTAGCGGGCAGAGTAAGGTTATAGGAGAGTCATCCATAGCAGCAAGTGGAGACCGTTCAAATGGTGGTGGAGAGGCAAGCGGTGGGAAGCGTACCTCTGACCTTTCAACTGCTGAGAGACAGGAAATTCAGATGAAGAAGGCAAAGCTAATCAGCATGCTCGATGAGGTAGAGCAAAGGTACAGGCAGTACCATCACCAGATGCAGATTGTAATTTCCTCATTTGAACAAGCCGCAGGGATTGGCTCAGCGAGAACTTACACAGCACTTGCACTGCAAACAATCTCCAAGCAATTTCGGTGTTTGAAAGATGCAATTACAGGCCAAATTCGAGCTGCAAATAAGAGCTTGGGTGAAGAAGATTGCTTTGGAGGAAAACTTGAAGGGTCAAGGCTCAAATACGTGGACCATCATCTGCGACAACAGCGAGCTCTCCAACAGTTGGGAATGATCCAGCACAACGCTTGGAGACCCCAGAGAGGATTGCCAGAAAGATCGGTTTCTGTTCTTCGTGCTTGGCTCTTCGAGCACTTCCTCCACCCCTACCCCAAGGATTCAGACAAACACATGCTTGCCAAACAAACAGGGCTCACCCGGAGCCAGGTTTCTAATTGGTTCATAAATGCTCGGGTTCGGCTTTGGAAGCCAATGGTGGAAGACATGTACTTGGAGGAGATGAAGGAGCATGAACAAAATGGGTCAGAGGACAAAACAAGCAAGAGCAGTGATGATCCTGGAACAAAATCTGCAGCCTCACAAGAGAAAGGTACTGGTACTGGCACTGACACTGAAGCTAAAAGTTTCAATTCCATGCAAGACGTTGGTGCGAACCAGAACGCGTCTACAGTTTCAGTTTCTAAACCATCAACTTCATCAGCTGGGGGAAATGCGAGGAACCATTCAGGTTTCAGCTTCATGGGGTCATCAGAGCTGGAAGGGATCACACAAGGAAGTCCCAAGAAACCAAGGAACCATGACGTTCTGCAGTCCCCAAGTAGTGTTCCATCAATAAACATGGATGCCAAACCCAATGAGGAAAGCACTGAGCATCTTTCAACGAAATTTGGAGATGAGAGGCAGAGCAGAGATGGATACTCTTTCATGGGGAACCAAACAAACTTCATTGGAGGTTTTGGGCAATACCCAATTGGGGAAATTGGTAGGTTTGATGCAGAGCAATTCACACCAAGGTATTCAGGTAATGGAGTTTCCCTCACTCTAGGACTGCCTCACTGTGACTCGTTATCAGGAACCCATCAAACATTTCTCCCAAATCAGAACATTCAATTGGGAAGGAGACTGGACATTGGTGAACCAAACGAGTTTGGTGCCGTAAACACTTCCACTCCTCACTCATCAGCTGCATTTGAGAATATCAACATGCAGAACCCAAAGAGGTTTGCGGCACAATTGTTGCCAGACTTTGTGGCCTAA 2100 0.4976 MATYFHGNSEIQAPDGLQTLVLMNPGFIQYSDTPPPQPPPHASNLVFLNSAATIAANNSLTPQSLQHAPPTHTQQFVGIPLPTTASQDPNHQSMHAHHDVSALHGFVPRMQYSLWNTIDPNAAARDTPRAQQGLSLSLSSQQAGMGSFRVDRDVASQGQAPALSGEDARVPGGSSSSASGVTNGASGIQSVLLSSKYLKAAQELLDEVVNVNNGIKTELAKKASGQSKVIGESSIAASGDRSNGGGEASGGKRTSDLSTAERQEIQMKKAKLISMLDEVEQRYRQYHHQMQIVISSFEQAAGIGSARTYTALALQTISKQFRCLKDAITGQIRAANKSLGEEDCFGGKLEGSRLKYVDHHLRQQRALQQLGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEDMYLEEMKEHEQNGSEDKTSKSSDDPGTKSAASQEKGTGTGTDTEAKSFNSMQDVGANQNASTVSVSKPSTSSAGGNARNHSGFSFMGSSELEGITQGSPKKPRNHDVLQSPSSVPSINMDAKPNEESTEHLSTKFGDERQSRDGYSFMGNQTNFIGGFGQYPIGEIGRFDAEQFTPRYSGNGVSLTLGLPHCDSLSGTHQTFLPNQNIQLGRRLDIGEPNEFGAVNTSTPHSSAAFENINMQNPKRFAAQLLPDFVA 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02309 699 Coils Coil 262 282 - -
Bach1g02309 699 CDD homeodomain 378 439 IPR001356 GO:0003677
Bach1g02309 699 MobiDBLite consensus disorder prediction 230 261 - -
Bach1g02309 699 SMART prehox3 186 330 IPR006563 -
Bach1g02309 699 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 89 464 - -
Bach1g02309 699 Pfam Homeobox KN domain 395 434 IPR008422 GO:0003677|GO:0006355
Bach1g02309 699 MobiDBLite consensus disorder prediction 449 584 - -
Bach1g02309 699 FunFam BEL1-like homeodomain protein 9 381 443 - -
Bach1g02309 699 SMART HOX_1 378 442 IPR001356 GO:0003677
Bach1g02309 699 MobiDBLite consensus disorder prediction 449 465 - -
Bach1g02309 699 MobiDBLite consensus disorder prediction 544 564 - -
Bach1g02309 699 ProSiteProfiles 'Homeobox' domain profile. 375 438 IPR001356 GO:0003677
Bach1g02309 699 MobiDBLite consensus disorder prediction 466 537 - -
Bach1g02309 699 Gene3D - 381 460 - -
Bach1g02309 699 MobiDBLite consensus disorder prediction 565 583 - -
Bach1g02309 699 MobiDBLite consensus disorder prediction 153 183 - -
Bach1g02309 699 SUPERFAMILY Homeodomain-like 379 444 IPR009057 -
Bach1g02309 699 Pfam Associated with HOX 191 329 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02309 Bach-Chr1 34976004 34978558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02309 1 699 Homeobox Transcription Factor Family AT2G35940 51.380 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Bach1g02309 POX 2.1e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02309 - - qsa:O6P43_006028 1056.97