Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02304 CCTCTCTCCTCACACTCTTCCCTCTCTTCTTCTCTCACCCTGCGTGCTTTTGCTACAAATTTTACCGACATGGTTCCAGCCTAATGGGGTTTCTCTACTTCTGCGTTGAATTTGATGCTGCTACTCCTTCCTCCGTTTCTAAGACTCAGATCTCCTCATACTGACGCTTTGTTGAAGACTGGATAAAATTGAGGAACTTATAAACAAACCAAATAAACTTCTGAATAATCCTTTTGGATAGTTTTGGAGGACCTATATGGCTATGCAAACTTTTTGTTTCAAAGAACATGAAGGAATTGTCCAAAATTCTGTGGGGCAGTTGTCATCCGTATCTTCTGCCCCCTGGTGGAATGCCTTTGGATCTCAATCAATTTATGGGGAGTCTTGTGGCACAATCAAGAATTTCTCATTGGAGCTTCCCAACCATGCAGACCAACTTGCTGCCACTCCTACTAAGTCAGCAGGAAGAGGAGCTGAACAACTGTTTGATAAAGGACATACAACTCAGTTCGCTATCTTTCCAGATGATTGTAAAATGTCAGGTGATGCACAAAAACCTCAGACAGCCATATCCATGCAATCATCAGTTCCTGATTCTCGCTCCCGTTTTGAGCATGGCTTCAGTCAGCCTATGATCTGTGCAAAATATCCTTACATGGATCAATTTTACGGGCTCTTCTCAAATTATGGACCTCAAGTTTCGGGCCGTATAATGCTGCCACTTGACTTGACATCCGATGATGAACCAATTTATGTAAATGCTAAGCAGTACCATGGAATCATCAGACGTCGGCAATCACGTGCAAAGGCTGTACTGGAGAATAAATTGACAAAACGTAGCAAGCCCTATACGCATGAATCACGCCATCTCCATGCAATGCGTCGACCAAGAGGATGTGGTGGTCGTTTCTTGAATACAAGGAATTCGAACAATGGAAATGGTAAAAGTGGGAGCGAAGTGAATAGAAGTGGTGAAGGGCAACTGCAGTCCAGTGTTTCTCAGAGTTCTGAAATGCTGTTATCTGAAGATGGAACATTGAATTCATCAAAGGAAACCAATGGCCGCAGTCCAAATATTTCTGGTTCAGAGGTGAGTAGCAGCATGTATTCAAGGGGAGGTCTTGATAGCTTTACAGTCAATCATCTTGGATCAGCTGTGCACTCTCTGGCAGACATGTTAGATAGTAGGCGTGGTATCGTTATGCCCACAAAATGGGTTGCAGCAGTAGGTAATTGCTGCAACCTTAACGTTTGATCGGCAAGGACAC 1268 0.4361 MAMQTFCFKEHEGIVQNSVGQLSSVSSAPWWNAFGSQSIYGESCGTIKNFSLELPNHADQLAATPTKSAGRGAEQLFDKGHTTQFAIFPDDCKMSGDAQKPQTAISMQSSVPDSRSRFEHGFSQPMICAKYPYMDQFYGLFSNYGPQVSGRIMLPLDLTSDDEPIYVNAKQYHGIIRRRQSRAKAVLENKLTKRSKPYTHESRHLHAMRRPRGCGGRFLNTRNSNNGNGKSGSEVNRSGEGQLQSSVSQSSEMLLSEDGTLNSSKETNGRSPNISGSEVSSSMYSRGGLDSFTVNHLGSAVHSLADMLDSRRGIVMPTKWVAAVGNCCNLNV 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02304 332 SMART cbf3 160 221 IPR001289 GO:0003700|GO:0006355
Bach1g02304 332 PRINTS CCAAT-binding transcription factor subunit B signature 164 186 IPR001289 GO:0003700|GO:0006355
Bach1g02304 332 PRINTS CCAAT-binding transcription factor subunit B signature 195 218 IPR001289 GO:0003700|GO:0006355
Bach1g02304 332 ProSiteProfiles NF-YA/HAP2 family profile. 161 221 IPR001289 GO:0003700|GO:0006355
Bach1g02304 332 MobiDBLite consensus disorder prediction 218 282 - -
Bach1g02304 332 MobiDBLite consensus disorder prediction 189 282 - -
Bach1g02304 332 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 45 284 IPR001289 GO:0003700|GO:0006355
Bach1g02304 332 Gene3D - 161 223 - -
Bach1g02304 332 MobiDBLite consensus disorder prediction 189 204 - -
Bach1g02304 332 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 163 218 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02304 Bach-Chr1 34936464 34940404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02304 5 330 CCAAT-HAP2 Transcription Factor Family AT3G05690 42.442 2.56e-62 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Bach1g02304 CBFB_NFYA 1.1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02304 K08064 - gmx:100527677 478.404