Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02302 ATGAACAACACAACTGATTCTAGTGGATTCCTGGGCTCTAACAATATCAGTGGCTTTGGCTATGGAATAGGAGTTTCAGTTGGAATTTTAATGCTCATTACGGTTATCACACTTACCTCTTACTTCTGCACCCGCCGCACACAGGCACCAACAGCTCCAGCTACTCGGAGAATTAATGCCTCCAACTTCCTTGAACTACAACACTCGGTGGTCGATGTGGGGCTAGATGAAGCTATAATCGTGAGTTATCCACAGCTGCTCTACTCTGAAGCCAAGATTCACAAACCAGATTCCACTGCTACTTGCTGCTCCATTTGTCTGGTAGATTACAAGGATACTGATATGCTTCGCCAGCTGCCTGATTGTGGACACCTCTTCCATATCAAGTGCATAGACCCATGGTTGAGACTCCATCCCACTTGTCCACTCTGCAGAACATCTCCAATCCCGACACCACTCTCAACACCTCTCGCCGAAGTGGTTCCATTAGCAAGCAGGCGAGATTAA 507 0.4714 MNNTTDSSGFLGSNNISGFGYGIGVSVGILMLITVITLTSYFCTRRTQAPTAPATRRINASNFLELQHSVVDVGLDEAIIVSYPQLLYSEAKIHKPDSTATCCSICLVDYKDTDMLRQLPDCGHLFHIKCIDPWLRLHPTCPLCRTSPIPTPLSTPLAEVVPLASRRD 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02302 168 ProSiteProfiles Zinc finger RING-type profile. 103 145 IPR001841 -
Bach1g02302 168 SUPERFAMILY RING/U-box 82 150 - -
Bach1g02302 168 CDD RING-H2_PA-TM-RING 102 145 - -
Bach1g02302 168 SMART ring_2 103 144 IPR001841 -
Bach1g02302 168 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 159 IPR045899 -
Bach1g02302 168 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 61 149 IPR013083 -
Bach1g02302 168 Pfam Ring finger domain 103 145 IPR001841 -
Bach1g02302 168 FunFam E3 ubiquitin-protein ligase ATL6 64 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02302 Bach-Chr1 34922586 34923092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02302 6 165 C3H Transcription Factor Family AT2G35910 59.877 1.41e-56 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02302 - - qsa:O6P43_009684 268.47