Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02290 ATGGAGGTTCCAGAAATGGAAGGCAAGCACTCTGAAAGTCATATGACATCAGCTGCTGCCTTTGTGGAAGGGGGGATTCAAGAAGCCAATGATGATGCTTGCAGCATATGCCTTGAGGATTTTTGTGAAAATGATCCTGCAGCGGTGACTACCTGCAAGCATGAGTTTCACCTGCAGTGCATTCTTGAATGGTGTCAGAGAAGCTCCCAGTGTCCTATGTGTTTGCAATCTATTAGTTTGAAGGATCCTTCAAGTCAAGAATTGTTTGAGGCAGTAGAGCAGGAGAGGACCTTGAGAAATACTCCGTCAAGAAATGCTGCTATATTTCATCATCCTGCACTTGGTGATTTTGAATTGCAGCATTTACCCGTGGGTGTAAATGATGTGGATATTGAAGAGCGGATACTTCGACATCTAGCTGCTGCTGCAGCAATGGGCAGAGCACACTACCTGGGTCGGAGGGAAGGGCAAAGAGCTAGACCATCTGGCCATGGTCGTCCACACTTTTTAGTATTTTCAACTCAGCCTAGTGCGCCTACATCTGATCCTATTTTACCTGCTGGAGGGACAACTGAACCTGCTGCAATTCCTGTTGGAAGTCCATCTACCCCACTTACATCTGATGGAGATGAACCACCACAGCAGATTGCATGTCTTCAAACTCGGAGCTCTTCTCCACCTGCCAGATCTACTTTCATGCTAACAAATCGTCAAGGAGCTTACTCTCATGATCAGGGTTCTATTGTTCATTCTTCAACACCAAACCAAGATAGAGCAGGACCATCAGAATTTCAGTCATTTTCTGAGTCTCTGCGGTCCAGACTAAGTTCAACGTCAATGAGATACAAAGAATCAATTTCAAAGAGCACTAGGGGATGGAGGGAGAGGCTGTTCTTTCGTAATTCTTCCATGTCAGATCTTGGTTCTGAAGTTAGGAGAGAGTTGAACGCTGGGATTGCTAATGTGTCTCGATTGATTGAACGCCTTGAAACTGGAGAAAACAATAGAACTGGGGGTACTTCCACGTCAAGTAATTTGGCAGATTGTTCCATTGTGGAGACAAGTGACCGGGACAATGCTGAAGCTCGTGGAGAAAACTCTTTGGGTGACAACAATACTCCGGCTACTTGTTCTACTGGCCGACATTCAAGTTGA 1155 0.4554 MEVPEMEGKHSESHMTSAAAFVEGGIQEANDDACSICLEDFCENDPAAVTTCKHEFHLQCILEWCQRSSQCPMCLQSISLKDPSSQELFEAVEQERTLRNTPSRNAAIFHHPALGDFELQHLPVGVNDVDIEERILRHLAAAAAMGRAHYLGRREGQRARPSGHGRPHFLVFSTQPSAPTSDPILPAGGTTEPAAIPVGSPSTPLTSDGDEPPQQIACLQTRSSSPPARSTFMLTNRQGAYSHDQGSIVHSSTPNQDRAGPSEFQSFSESLRSRLSSTSMRYKESISKSTRGWRERLFFRNSSMSDLGSEVRRELNAGIANVSRLIERLETGENNRTGGTSTSSNLADCSIVETSDRDNAEARGENSLGDNNTPATCSTGRHSS 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02290 384 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 12 83 IPR013083 -
Bach1g02290 384 MobiDBLite consensus disorder prediction 333 352 - -
Bach1g02290 384 MobiDBLite consensus disorder prediction 365 384 - -
Bach1g02290 384 ProSiteProfiles Zinc finger RING-type profile. 34 74 IPR001841 -
Bach1g02290 384 SMART ring_2 34 74 IPR001841 -
Bach1g02290 384 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 16 83 - -
Bach1g02290 384 MobiDBLite consensus disorder prediction 331 384 - -
Bach1g02290 384 Pfam Ring finger domain 33 74 IPR001841 -
Bach1g02290 384 MobiDBLite consensus disorder prediction 154 214 - -
Bach1g02290 384 SUPERFAMILY RING/U-box 26 81 - -
Bach1g02290 384 MobiDBLite consensus disorder prediction 240 267 - -
Bach1g02290 384 MobiDBLite consensus disorder prediction 196 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02290 Bach-Chr1 34838859 34841739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02290 26 82 C3H Transcription Factor Family AT4G00335 42.105 2.86e-12 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02290 K19043 - gmx:100803582 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g01029 8 6867729 6871577 Bach1g02290 1 34838859 34841739 BWGD
Bach1g02290 1 34838859 34841739 Bach1g02290 1 34838859 34841739 ECH