Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02283 ATGCTTAGCATCAAGAGATTGTTGTACCAGACCAGAAAGATAAAGAAAAAGAACGTAACCAGACGCAAATTGAGAACCCAAATTCCTTGTAAAACAAAATTGCCGGTCCAAGAAGACGACGGAGTACTAGAAGATCCTGAAGAAGATGGTTTCAAGCTCAGTTCTGCCACATCACAGGCTTATGTGGTTCAGCCCTTGGGCAATCTTTATTTAAACCCAGGCTCTACTAACTCCAGAGACACGGGTCTAGGTAATATTCACACCCTGACGGATGAGCTTGTTCTTGAAATTCTTGGCTTGTTGGGTCATATTGAATTGGGTGTTTTGGCAACTGTGAGCAAGTCTTTTTATGTTTTTGCCAACCATGAGCCCCTTTGGAGGAATCTTGTATTGGAAAATTTTAGTGGTGGTTTTCGCTACAATGAGTCTTGGAAATCTACTTTTGTTAGTGCTAATTACCCTGCATTTAATATTTTAAATAATGCCGTTCAGAATTTGAAAGTAAGAGACTTCTATTCTGATTATCTCTTTCAAAGTTGGCTCTGTGCTAATCTTGAAATGAAACCGGAATGGCTGGAAAGAGGTAATATAACTCGAAAGAAGGGCATTTCGGTTGAAGAATTTATATTGAACTTTGAGGAGCCAAATAAGCCAGTGTTATTGGAAGGTTGCCTTGATGATTGGGTTGCTTTGAAAAATTGGGATAGAGACTATTTGCTGCAAATGTGTGGTGATGTTAAGTTTTCAGCTGGGCCAGTAGAGATGAAGCTTGAAGATTATTTTGGGTACTCGGATCAAATGAGAGAAGAGAGACCATTGTATTTGTTTGATCCGAAGTTTGCCAAAAAAGTTCCAAAGTTAGCCTCAGAATATGAAGTTCCAGTGTACTTTCGGGAGGACCTGTTTCGCGTTCTGGGTAATGTCAGACCTGACTACAGGTGGATTATCATTGGACCAGCTGGATCTGGTTCATCTTTTCATGTTGATCCAAATTCAACTTCCGCTTGGAATGCAGTTATCAAGGGGTCCAAGAAGTGGATATTATTTCCTCCTGATGTGATTCCACCAGGGGTTCACCCTAGCCCTGATGGCGCAGAGGTTGCTTCTCCTGTTTCAATAATTGAGTGGTTCATGAACTTCTACAGTGCGACCAAAAATTCGAAAAAGAAACCTGTTGAGTGCATCTGTAAAGCTGGGGAGGTTATCTTTGTACCACATGGATGGTGGCATTTGGTGATCAACCTGGAGGAGTCTATAGCCATTACCCAAAATTATGTTAGTAGAAGAAATTTGTTGAATGTCTTGGATTTTCTTAAGAGGCCAAATGCTAGCACACTGGTATCTGGAACAAGAGATCGGGTGAACTTGTATGAGAAGTTCAAGAATGCTCTTGAGGCTTCTCTTCCGGGAACAATTGATGAAGCGACCCTCCGAGAAGAAGAGAAAAAGGCCCAGCAGAGAAAACCAACCTTTTGGGATTCTGTGACAGATTCCAAGGCGGGAGCTTTCAAGTTCTCCTTCTAG 1524 0.4154 MLSIKRLLYQTRKIKKKNVTRRKLRTQIPCKTKLPVQEDDGVLEDPEEDGFKLSSATSQAYVVQPLGNLYLNPGSTNSRDTGLGNIHTLTDELVLEILGLLGHIELGVLATVSKSFYVFANHEPLWRNLVLENFSGGFRYNESWKSTFVSANYPAFNILNNAVQNLKVRDFYSDYLFQSWLCANLEMKPEWLERGNITRKKGISVEEFILNFEEPNKPVLLEGCLDDWVALKNWDRDYLLQMCGDVKFSAGPVEMKLEDYFGYSDQMREERPLYLFDPKFAKKVPKLASEYEVPVYFREDLFRVLGNVRPDYRWIIIGPAGSGSSFHVDPNSTSAWNAVIKGSKKWILFPPDVIPPGVHPSPDGAEVASPVSIIEWFMNFYSATKNSKKKPVECICKAGEVIFVPHGWWHLVINLEESIAITQNYVSRRNLLNVLDFLKRPNASTLVSGTRDRVNLYEKFKNALEASLPGTIDEATLREEEKKAQQRKPTFWDSVTDSKAGAFKFSF 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02283 507 ProSiteProfiles JmjC domain profile. 282 442 IPR003347 -
Bach1g02283 507 FunFam F-box protein At1g78280 177 427 - -
Bach1g02283 507 Pfam Cupin-like domain 207 425 IPR041667 -
Bach1g02283 507 SUPERFAMILY F-box domain 81 149 IPR036047 GO:0005515
Bach1g02283 507 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 83 505 - -
Bach1g02283 507 Gene3D Cupin 161 427 - -
Bach1g02283 507 SUPERFAMILY Clavaminate synthase-like 196 440 - -
Bach1g02283 507 Gene3D - 77 155 - -
Bach1g02283 507 SMART cupin_9 273 442 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02283 Bach-Chr1 34784092 34786533 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02283 74 431 Glycosyltransferase AT1G78280 37.772 9.27e-76 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Bach1g02283 Cupin_8 5.7e-23 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02283 - - qsa:O6P43_009409 806.594