Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02265 ATGAGGGGTAGAAGCTACAGCTACAGTCCTTCACCCCCCAGGGGTTATAGCAGGAGACACCGCAGCCCTAGTCCTAGAGGTCGGTATGGAGGCCGTGGTAGGGATCTTCCAACAAGTCTTTTGGTTCGGAACCTCCGCAGAGATTGCAGGCCAGAAGATCTCCGTGGACCATTTGGCCAGTTCGGTCATCTCAAGGACATTTACCTGCCTCGAGATTATTATACTGGGGAACTACGAGGTTTTGGTTTTGTCCAATATGTCAATCCAGCAGATGCTGCAGACGCTAAATATAACATGGATGGCCAAATCCTACTTGGTCGTGAGTTGACTGTGGTGTTTGCTGAAGAGAACAGAAAGAAGCCTGCAGAAATGAGGGCTAGAGAACGTACTAGGGGTGGGTCATACGATCGGAGGCGATATGCACGAACTTATTCTCGCAGTCCAGAGTATCCTCCTTCTCCAAGGCGAAGACACTATTCAAGGTCAATCTCACCAAGATACAGGAGATTTAGAGAGCGTTCATACTCGAGATCTCCTTATGGATCAAGAAGCCGCAGTCGAAGCAGGAGCACGAGCTACTCGAGGTGA 588 0.4983 MRGRSYSYSPSPPRGYSRRHRSPSPRGRYGGRGRDLPTSLLVRNLRRDCRPEDLRGPFGQFGHLKDIYLPRDYYTGELRGFGFVQYVNPADAADAKYNMDGQILLGRELTVVFAEENRKKPAEMRARERTRGGSYDRRRYARTYSRSPEYPPSPRRRHYSRSISPRYRRFRERSYSRSPYGSRSRSRSRSTSYSR 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02265 195 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 38 116 IPR000504 GO:0003723
Bach1g02265 195 MobiDBLite consensus disorder prediction 1 36 - -
Bach1g02265 195 Gene3D - 35 150 IPR012677 -
Bach1g02265 195 SMART rrm1_1 39 112 IPR000504 GO:0003723
Bach1g02265 195 MobiDBLite consensus disorder prediction 118 144 - -
Bach1g02265 195 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 37 193 - -
Bach1g02265 195 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 40 109 IPR000504 GO:0003723
Bach1g02265 195 MobiDBLite consensus disorder prediction 179 195 - -
Bach1g02265 195 MobiDBLite consensus disorder prediction 118 195 - -
Bach1g02265 195 SUPERFAMILY RNA-binding domain, RBD 38 143 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02265 Bach-Chr1 34629785 34631669 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02265 38 182 Eukaryotic Initiation Factors Gene Family AT4G34110 26.027 9.14e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02265 K12900 - pvy:116132678 212.231