Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02241 ATGGAGCTAGCGTTGAGTTTAGGAGATGCATCAAAAGCCTTCTCTTTTCTTGGCAACCCCACAAAAAGGCCCAACAAAGATCCTCATCCTGGCTTCTGCATTGCTCTAGGGGGTGCTTTCGCCACTGGAAAGGCCTCAGAAGATAAAAGAGTGAATCATGGACATAGAGAAGAGCATGGCCGAGATGAGTCGAGGGCTTCCTCAGATCCACCCCTTCAGCTCGACCTTCTTCCCTTTACTCCTGTTCCTCGAACCCAACCACCTTCTCAGCTCCGGATTCCTTGGCTTTCTGATGCATATCCAGGTGCGAGGGCGTTGGATGTGAACCGTTTGGCGGTGGCGGCGACACCGCCAGTGGAGGAGACCGACGATGGTGCTACTATGTCGTCTCCTAACAGTGCGGTGTCGTCGTTTCAAATGGATTTTTGCATAAGGAATAACGGTAGTGTGGGGAGAAACAAGAGAGAGAATGAGGGGGACGCTGAGAGAGCGAGCGATGACGACGACAACGGCTCAACTCGAAAGAAACTCAGACTCTCCAAGGAGCAGTCAGCTTTCCTTGAGGAGAGCTTCAAAGAACATACTACTCTCAATCCTAAGCAGAAACTTGCTCTTGCTAAGCAGTTAAATCTTCGTCCTCGCCAAGTAGAAGTTTGGTTTCAGAATAGAAGAGCAAGGACAAAGTTGAAGCAGACGGAGGTAGATTGTGAATATTTAAAGCGATGCTGCGAGACACTGACGGAAGAGAATAAGAGGTTGCAGAAGGAACTGCAAGAGCTAAGAGCTTTAAAAGCCTCCCAGCCATTTTACATGCAGCTCCCAGCTACCACTCTCACCATGTGTCCCTCTTGTGAACGTGTGGCCACCAACTCTTCCTCCGGAACCGCAACCGCCGCCAATCAAACCACCACCAACAGTTCTCTAATCCCACCATCATTGTCGCTTAGCAACCCGAGAGGTCTGCCCTTCACTAATGCTCAAACCCACACGCAGCAGGCGAAACCTCATGATTAG 1014 0.503 MELALSLGDASKAFSFLGNPTKRPNKDPHPGFCIALGGAFATGKASEDKRVNHGHREEHGRDESRASSDPPLQLDLLPFTPVPRTQPPSQLRIPWLSDAYPGARALDVNRLAVAATPPVEETDDGATMSSPNSAVSSFQMDFCIRNNGSVGRNKRENEGDAERASDDDDNGSTRKKLRLSKEQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENKRLQKELQELRALKASQPFYMQLPATTLTMCPSCERVATNSSSGTATAANQTTTNSSLIPPSLSLSNPRGLPFTNAQTHTQQAKPHD 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02241 337 FunFam Homeobox-leucine zipper protein 18 160 235 - -
Bach1g02241 337 SMART halz 230 273 IPR003106 GO:0006355|GO:0043565
Bach1g02241 337 CDD homeodomain 174 231 IPR001356 GO:0003677
Bach1g02241 337 ProSitePatterns 'Homeobox' domain signature. 205 228 IPR017970 GO:0000981|GO:0006355
Bach1g02241 337 MobiDBLite consensus disorder prediction 46 68 - -
Bach1g02241 337 SMART HOX_1 172 234 IPR001356 GO:0003677
Bach1g02241 337 Pfam Homeodomain 174 228 IPR001356 GO:0003677
Bach1g02241 337 MobiDBLite consensus disorder prediction 289 337 - -
Bach1g02241 337 Pfam Homeobox associated leucine zipper 230 264 IPR003106 GO:0006355|GO:0043565
Bach1g02241 337 MobiDBLite consensus disorder prediction 151 176 - -
Bach1g02241 337 ProSiteProfiles 'Homeobox' domain profile. 170 230 IPR001356 GO:0003677
Bach1g02241 337 MobiDBLite consensus disorder prediction 146 176 - -
Bach1g02241 337 Coils Coil 236 266 - -
Bach1g02241 337 Pfam HD-ZIP protein N terminus 97 138 IPR006712 GO:0005634
Bach1g02241 337 CDD bZIP 223 262 - -
Bach1g02241 337 MobiDBLite consensus disorder prediction 44 73 - -
Bach1g02241 337 Gene3D - 178 228 - -
Bach1g02241 337 SUPERFAMILY Homeodomain-like 167 231 IPR009057 -
Bach1g02241 337 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 56 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02241 Bach-Chr1 34458489 34459846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02241 88 286 Homeobox Transcription Factor Family AT3G60390 56.444 5.03e-70 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bach1g02241 Homeodomain 2.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02241 K09338 - tcc:18599131 395.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g01078 8 7166847 7168031 Bach1g02241 1 34458489 34459846 BWGD
Bach1g02241 1 34458489 34459846 Bach1g02241 1 34458489 34459846 ECH