Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02240 ATGGAGGAAGCGAATTCGGATTCAATGAACCTTGATTTGAATCTTGGTCCTGGCCCAGAGCCAGCAGCTAGCTCCATATCCAATGAACCTGTGAGCTTGGATGATTGGATTGGTGATCCTCTTCATCGAATTAGTGAAGCTGTTAGGCTTAGGGCTCGACAACGGTGGAGATGGCGGCATATCCCACCTGAAGCCCGAAACATCTCAATGGAGTTAAATCAATTTTTGGTCAACCCTGGTAATGGAGATGCATTGCAGGCTGGTGAAGGTAGTGTGGCAGCTGAGCAAAGAACAGAGGAAGTGCCAAAAGCATGTGAAAATAACAATGGTGTTACAGAAGATGAGACATCAGAGAAGAAAGATGATGTTGAAAAAGGTAGTGGCAACGATGGGAGCTTCTTTGATTGTAATATCTGTTTAGATCTGGCCAGGGATCCTGTTGTCACTTGTTGTGGTCATCTGTTTTGTTGGCCATGCCTCTATCGATGGCTACATGTGCATTCAGATGCTAAGGAATGTCCAATCTGCAAGGGAGAGGTGACAATTAAAAATGTTACCCCAATATATGGTCGGGGAAATAATGTCCCTGACCCAGAGGAAGATCCCACTCTTAAAGTCCCTCTTAGGCCTAATGCAAGGCGTGTTGAGAGTCTGAGACAAACCATTCAGAGAAATGCATTCCCTGTGGAGGAGATGATTCGCCGCATTGGGAGTAGAATTGATCTTACTAGGGATTTAGTTCAGCCCCATGAGACTGACCAAGCACGTGAAACAGCAGAGAGAACTAGTTCCTTGCTTAGTAGGTTTTTGACATCTCGAGGAATAAGGAGAGAGCATAATCCTGAGCCATCCCCAGATGATGTAATGGATTTAACACAAAACGTTGCTAGCACGGAAGCAGGAGATATCCGCAGGTTTCATCCCTCTATGTTTCGAAGAGGACATAGAACAACATTTTCTTCTCTTTCAACGGCGCTGAATAATGCTGAAAGGTTAGTTGAGGCGTATTTCCGTAGCCATCATATTGGTAGAAGCCAAGAACAACCTCCACCAGTTGATGACAGAGATTCCTTTTCAAGCATTGCTGCTGTCATAAATTCAGAGAGTCAAGTGGACAATGCTATAGAAATTGATTCCATGCTGTCCTCTTTGTCAACATCCTCTTCCAGGAGGAGAAATGACGCTTCAAGAGCTTCTGATGTAGATAGTGGAGATTCTCGTGCCCCAAGGCGGAGGCGGTTGAACTGA 1248 0.4511 MEEANSDSMNLDLNLGPGPEPAASSISNEPVSLDDWIGDPLHRISEAVRLRARQRWRWRHIPPEARNISMELNQFLVNPGNGDALQAGEGSVAAEQRTEEVPKACENNNGVTEDETSEKKDDVEKGSGNDGSFFDCNICLDLARDPVVTCCGHLFCWPCLYRWLHVHSDAKECPICKGEVTIKNVTPIYGRGNNVPDPEEDPTLKVPLRPNARRVESLRQTIQRNAFPVEEMIRRIGSRIDLTRDLVQPHETDQARETAERTSSLLSRFLTSRGIRREHNPEPSPDDVMDLTQNVASTEAGDIRRFHPSMFRRGHRTTFSSLSTALNNAERLVEAYFRSHHIGRSQEQPPPVDDRDSFSSIAAVINSESQVDNAIEIDSMLSSLSTSSSRRRNDASRASDVDSGDSRAPRRRRLN 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02240 415 SUPERFAMILY RING/U-box 132 189 - -
Bach1g02240 415 CDD RING-HC_AtRMA-like 134 177 - -
Bach1g02240 415 MobiDBLite consensus disorder prediction 87 126 - -
Bach1g02240 415 ProSitePatterns Zinc finger RING-type signature. 151 160 IPR017907 -
Bach1g02240 415 MobiDBLite consensus disorder prediction 393 415 - -
Bach1g02240 415 FunFam E3 ubiquitin-protein ligase RMA3 104 225 - -
Bach1g02240 415 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 87 194 IPR013083 -
Bach1g02240 415 MobiDBLite consensus disorder prediction 383 415 - -
Bach1g02240 415 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 106 321 IPR045103 GO:0005783|GO:0006511|GO:0061630
Bach1g02240 415 ProSiteProfiles Zinc finger RING-type profile. 136 177 IPR001841 -
Bach1g02240 415 SMART ring_2 136 176 IPR001841 -
Bach1g02240 415 MobiDBLite consensus disorder prediction 1 28 - -
Bach1g02240 415 MobiDBLite consensus disorder prediction 112 126 - -
Bach1g02240 415 Pfam Zinc finger, C3HC4 type (RING finger) 136 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02240 Bach-Chr1 34446755 34448002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02240 1 406 C3H Transcription Factor Family AT3G58030 53.226 1.20e-133 389