Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02225 TTTTAAGGTTATGGCCGGGGTTTTTGCTGCTTGCTAGGTGTTTTACCTCTTCTATATCTTTAAACCTCCTGTGGATCTCTCTGCAATTGAAGTTTTTTCTCTGCGGTTATCCCTGCAATCTATTTTTTTCATTCTGGTTTTTTTTTTTTTGGATCTTGATCTACTCCTTACTTCGATGGATACTCGCAAGAGAGAGAGGCTTGAGGTTGGCTTCAACGGTAATGGCGACCCCAAGAAATCTAAGCAAGAAATGGAGTCCTTATCAACTGGTGTAGGAAGCAAATCGAAGCCATGTACCAAGTTTTTCAGCACTGCTGGCTGCCCATTTGGTGAGGGCTGCCACTTCTTGCACCATGTACCTGGTGGTTATAATGCTGTTGCCCAGATGATGAATCTGGCACCTGCTGTTCCTCCAGTGTCTAGAAATATTGCTGCTCCACAACCATTTCCTAATGGTTCTGCGTCATCTACCGTTAAAACCCGCATATGCAAGAAGTATAACAGTGCTGAAGGCTGCAAATTTGGTGACAAATGCCATTTTGCACATGGTGAATGGAAACATGGCAAGCCTATTGCTCCATCAGTTGATGATCATCGCACCATGGGACCTGGACCTATTTCTGGCCGTATGCCCAATCGAATGGAGCCTCCTCCTGGTCCTGTTGGTAGTTTTGGTGCCATCGCCACTGCCAAGATCAGTGTAGAAGCTTCCCTGGCTGGAGCAATCATTGGGAAGGGTGGTGTGAACTCCAAGCAGATCTGTCGCCAAACAGGAGCCAAACTATCGATTCGGGAGCATGAATCAGATCCAAATCTCAGAAACATTGAACTTGAGGGAACTTTTGGACAGATTAAGGAAGCGAGTAACATGGTACAAGAATTAATTTCAACTGTCTCAATGTCCGCCAATCCCAAGACACCTGGTGTCCCCGGTGCCCCAGCCTCTCGTGGAAGCAACTATAAGACCAAGCTGTGTGAGAATTTTGGGAAAGGATCTTGCACCTTTGGAGAAAGATGTCACTTCGCACACGGGGCTGCTGAATTGCGAAAATCAGGAGTATGA 1063 0.4619 MDTRKRERLEVGFNGNGDPKKSKQEMESLSTGVGSKSKPCTKFFSTAGCPFGEGCHFLHHVPGGYNAVAQMMNLAPAVPPVSRNIAAPQPFPNGSASSTVKTRICKKYNSAEGCKFGDKCHFAHGEWKHGKPIAPSVDDHRTMGPGPISGRMPNRMEPPPGPVGSFGAIATAKISVEASLAGAIIGKGGVNSKQICRQTGAKLSIREHESDPNLRNIELEGTFGQIKEASNMVQELISTVSMSANPKTPGVPGAPASRGSNYKTKLCENFGKGSCTFGERCHFAHGAAELRKSGV 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02225 295 SUPERFAMILY CCCH zinc finger 99 126 IPR036855 GO:0046872
Bach1g02225 295 ProSiteProfiles Type-1 KH domain profile. 169 233 - -
Bach1g02225 295 CDD KH-I_AtC3H36_like 172 237 - -
Bach1g02225 295 FunFam Zinc finger CCCH domain-containing protein 94 127 - -
Bach1g02225 295 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 159 239 IPR036612 GO:0003723
Bach1g02225 295 Gene3D - 94 128 - -
Bach1g02225 295 Gene3D - 255 293 - -
Bach1g02225 295 ProSiteProfiles Zinc finger C3H1-type profile. 261 288 IPR000571 GO:0046872
Bach1g02225 295 SUPERFAMILY CCCH zinc finger 260 291 IPR036855 GO:0046872
Bach1g02225 295 SMART kh_6 168 238 IPR004087 GO:0003676
Bach1g02225 295 Pfam KH domain 172 235 IPR004088 GO:0003723
Bach1g02225 295 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 262 286 IPR000571 GO:0046872
Bach1g02225 295 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 101 126 IPR000571 GO:0046872
Bach1g02225 295 MobiDBLite consensus disorder prediction 1 36 - -
Bach1g02225 295 PANTHER CCCH ZINC FINGER/TIS11-RELATED 22 155 IPR045877 GO:0003729
Bach1g02225 295 SMART c3hfinal6 34 61 IPR000571 GO:0046872
Bach1g02225 295 SMART c3hfinal6 261 287 IPR000571 GO:0046872
Bach1g02225 295 SMART c3hfinal6 99 126 IPR000571 GO:0046872
Bach1g02225 295 FunFam Zinc finger CCCH domain-containing protein 256 292 - -
Bach1g02225 295 ProSiteProfiles Zinc finger C3H1-type profile. 34 62 IPR000571 GO:0046872
Bach1g02225 295 SUPERFAMILY CCCH zinc finger 35 61 IPR036855 GO:0046872
Bach1g02225 295 Pfam RNA-binding, Nab2-type zinc finger 39 59 - -
Bach1g02225 295 ProSiteProfiles Zinc finger C3H1-type profile. 99 127 IPR000571 GO:0046872
Bach1g02225 295 Gene3D K Homology domain, type 1 170 240 IPR036612 GO:0003723
Bach1g02225 295 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02225 Bach-Chr1 34352720 34356254 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bach1g02225 KH_1 1.5e-11 CL0007
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02225 - - gmx:100803981 499.975