Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02216 ATGGGTTCAAGCTCTGTGAACAAATCAGGTGCTGCTTCCTCCTCGCCACCCGACCCCTCCATTGAGTCCCTCAATGGGTTGAAGTTCGGGCAAAAAATCTACTTTGAGGATGTGGGTCTCGGGGCTCCGACCAAATCCAGTGGCGGGGCTTCATCGTCCTCTGGGGCAACCCCGACAAAGAAGGGAAGGGGCGGCGCCGTTCAGAGCACTCAGCCTCCTAGGTGTCAGGTTGAGGGCTGTAAAGTAGATCTGAGTGACGCTAAGGCTTACTATTCCAGGCATAAAGTCTGCGGCATGCACTCAAAATCCTCTAAGGTTATTGTCGCTGGTCTTGAGCAAAGGTTTTGCCAACAGTGTAGCAGATTTCATTTGCTTCCTGAATTTGATCAAGGAAAACGAAGTTGTCGCAGGCGACTAGCTGGCCATAATGAACGTCGGAGAAAGCCTCCTCCAAACTCCATATTGGCCTCTAACTACGGCAGACTTGCTTCCTCTGTTTTCGAAAACAGAGGCAGAGGTGGTAGCTTTCTAATGGAATTTGGTGCGTACCCAAAGCTTAATATGAGGACTGCATTGCCAACTCCGGGATCGTCTATGCAGGTTCCTGGAAATCAAACCACTACACTTTCCTGGCAGAGCAACTTGGAGACGCCACCTGACTTTTTCTTGCAAGGTTCTGTGGGTGGGACGGGCTTCCCTGGTCCCAGGAATCCACCTGGAGAAAGCTTTACGGGAACCACAGACTCAACCTGTGCTCTCTCTCTTCTGTCAAATGAAACATGGGCCCCCAGAAACAGAGCTCCAAATCTTGGGGTGAACAACTTCTTGAATGTCACCGGATCACCCATGACACAATTTGCTACATCTTCTCATGGCACCTCCATCCATCAATTTCCAAGTGCCTCGTGGTGTTTCAAGGGTTTTGATGCTAGCGATTGCCCAGACGAGGTTGTCCCTCATCTCGGTCTGGGTCAAATTTCGCAGCCTCCAACTAGTCAACTTCAAGGTGAGCTTGACTTGTCACAACAGGGTAGGAGGCATTATATGGAACTCGAGCAGTCCAAGGCATATGACTCTTCTCAGCATATGCATTGGTCACTTTAA 1104 0.5009 MGSSSVNKSGAASSSPPDPSIESLNGLKFGQKIYFEDVGLGAPTKSSGGASSSSGATPTKKGRGGAVQSTQPPRCQVEGCKVDLSDAKAYYSRHKVCGMHSKSSKVIVAGLEQRFCQQCSRFHLLPEFDQGKRSCRRRLAGHNERRRKPPPNSILASNYGRLASSVFENRGRGGSFLMEFGAYPKLNMRTALPTPGSSMQVPGNQTTTLSWQSNLETPPDFFLQGSVGGTGFPGPRNPPGESFTGTTDSTCALSLLSNETWAPRNRAPNLGVNNFLNVTGSPMTQFATSSHGTSIHQFPSASWCFKGFDASDCPDEVVPHLGLGQISQPPTSQLQGELDLSQQGRRHYMELEQSKAYDSSQHMHWSL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02216 367 MobiDBLite consensus disorder prediction 1 21 - -
Bach1g02216 367 FunFam Squamosa promoter-binding-like protein 14 66 136 - -
Bach1g02216 367 Gene3D - 65 136 IPR036893 GO:0003677|GO:0005634
Bach1g02216 367 MobiDBLite consensus disorder prediction 43 73 - -
Bach1g02216 367 SUPERFAMILY SBT domain 73 154 IPR036893 GO:0003677|GO:0005634
Bach1g02216 367 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 9 278 IPR044817 GO:0003677
Bach1g02216 367 ProSiteProfiles Zinc finger SBP-type profile. 72 149 IPR004333 GO:0003677
Bach1g02216 367 Pfam SBP domain 75 148 IPR004333 GO:0003677
Bach1g02216 367 MobiDBLite consensus disorder prediction 45 73 - -
Bach1g02216 367 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02216 Bach-Chr1 34278276 34281824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02216 27 367 SBP-box Gene Family AT2G42200 47.956 3.66e-74 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bach1g02216 SBP 7.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02216 - - gmx:100807165 510.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g01101 8 7345162 7348663 Bach1g02216 1 34278276 34281824 BWGD
Bach1g02216 1 34278276 34281824 Bach1g02216 1 34278276 34281824 ECH