Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02199 ATGGAGCAAACTCCAGGAGGCTTGCTTGGATCCAGTCTCCCAGTTCGCGAGCAAGACGAGACAGCACTTGAATCCATTCAATTCAACGAAGAAATCCATGGGATCATAGCGCCAGCCCCGGAAAACGCGAGTTCCTTCACTGCGCTTCTTGAACTCCCACCAACTCAAGCCATGGAGCTCCTTCACTCGCCGGACTGCCACGGAACCGCCGGTGCGGCCAGTGCCTCCGCGAAATCCATTTGCCAAATCAATGATCAGAAACCCTATCTTTTGAACTCTTTTAATGGGAATTTGACCTTTCCTTCTAACACTGCTTTGATCGAACGCGCCGCTAAGTTCTCCGTCTTTGCCGGTGAGAACTCGACAACCGAGGAGGCAAGCTCAGTTTTCCCCAACTCCGGTGCGAATTTGGAAAAAGTGAAGAATGAGCTCCCAGAAACTGATTCGAATCCAAGCTCAGCACAAGGTTTAGTTTCTGATCCTGGGGTTGAGAACAAGAACCAGAGGGCCACTAAGAGAAAGGAGCGAGAGAAGAAGGTTAAAGGGTCATCGAAGAAGAGTAAGAGCGTCGTCGACGTGACCTCCGGAGATGCTGAGAAGCTTCCCTACGTTCATGTTCGAGTTCGTCGAGGTCAAGCTACAGACAGCCATAGCTTAGCAGAAAGGGCTAGGAGAGAGAAGATAAATGCTCGTATGAAGCTTTTACAAGAGCTGGTCCCCGGCTGCAATAAGATATCAGGAACTGCGTTGGTGCTGGATGAAATCATCAACCATGTGCAATCTCTACAACGTCAAGTGGAGTTCTTATCGATGAAACTGGCAGCAGTTAATCCTAGAATTGATTTCACCCTTGACAGCATATTGGCTACAGAAGGTGCATCTTTAATGGACAGTAATTTCCCCAGCATGGTTACGCCTTTAATGTGGCCAGAAATGTCGGACAATGGAAACAGACAACAATATCAACAACAATGGCAATATGAGGCCTTCCCCCAACCACTTTGGGCCAGGGAAGAAGACAACCACAATTTCATGACTTCAGAAAACTCACGATTGAGTTACGATTCATCGGCAAATTCAGCTTCTCTGCACTCAAACCAGTTGAAGATGGAGCTCTGA 1119 0.4808 MEQTPGGLLGSSLPVREQDETALESIQFNEEIHGIIAPAPENASSFTALLELPPTQAMELLHSPDCHGTAGAASASAKSICQINDQKPYLLNSFNGNLTFPSNTALIERAAKFSVFAGENSTTEEASSVFPNSGANLEKVKNELPETDSNPSSAQGLVSDPGVENKNQRATKRKEREKKVKGSSKKSKSVVDVTSGDAEKLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEFLSMKLAAVNPRIDFTLDSILATEGASLMDSNFPSMVTPLMWPEMSDNGNRQQYQQQWQYEAFPQPLWAREEDNHNFMTSENSRLSYDSSANSASLHSNQLKMEL 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02199 372 Coils Coil 252 272 - -
Bach1g02199 372 MobiDBLite consensus disorder prediction 146 165 - -
Bach1g02199 372 MobiDBLite consensus disorder prediction 143 192 - -
Bach1g02199 372 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 210 282 IPR036638 GO:0046983
Bach1g02199 372 CDD bHLH_AtBPE_like 202 287 - -
Bach1g02199 372 Pfam Helix-loop-helix DNA-binding domain 216 263 IPR011598 GO:0046983
Bach1g02199 372 Gene3D - 209 281 IPR036638 GO:0046983
Bach1g02199 372 FunFam transcription factor bHLH48-like isoform X1 209 281 - -
Bach1g02199 372 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 212 262 IPR011598 GO:0046983
Bach1g02199 372 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 104 351 IPR024097 GO:0006355
Bach1g02199 372 SMART finulus 218 268 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02199 Bach-Chr1 34161264 34165231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02199 6 372 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 53.418 1.40e-109 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach1g02199 HLH 1.4e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02199 - - vun:114168708 496.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g01118 8 7458254 7462833 Bach1g02199 1 34161264 34165231 BWGD
Bach1g02199 1 34161264 34165231 Bach1g02199 1 34161264 34165231 ECH