Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02194 ATGGCTGCTACATTGTGTACATACCTATTCCTTCTCTCTGTAACTGTAAGCTTTACATTTCTGAATCTTAGCTCATGTTCATCAGAGGCTGAGATCCTGCTCTCCTTCAAAGCCTCCATTGAAGACACTAAGAAGTCTCTTGCAAGCTGGTCCAATACTTCAGCAAGCCATTACTGTAACTGGACTGGAATCACCTGCACCACTGCATCTGTTACTTCTATTAACCTTCAAAGCTTAAACCTTTCTGGGGATATCTCATCTTCAATATGTGACCTTCCGAATCTGACTGAACTCAATCTTGCAGATAATCTATTCAACCAGCCCATCCCTCTTCATCTTTCTCACTGCAGTTCGTTGCAAGTTTTGAATCTCAGCAACAATCTTATCTGGGGCACTATCCCGTCACAGATTTCTCAGTTTGGTTCCTTGAGAGTGCTTGATTTCAGCAGAAACCACATAGAAGGGAATATCCCAGAGAGCTTAGGCACATTGAAGAACCTTCAAGCCCTCAGCGTGGGAAGTAACTTGCTATCAGGTAGTGTACCTAGTATTTTTGGGAATTTCACTAAGCTTGCTGTGCTTGATTTGTCTCAAAATAAGTACTTGGTGAGTGAGATTCCTAAGGATATTGGGGAACTTGAAAATCTCCAACAGCTTCGGTTGCAGAGCTCTGGTTTTCAAGGTGAAATTCCTGATTCTTTTGGGAGCCTGCTTAGTTTGACTCATTTAGACCTCTCTGAGAACAATCTAACCGGTGTGGTTCCTCTTGCTTTGGTGTCTTCTCTGAAGAACCTGGTCTCTTTAGATGTTTCTCAAAACAAGCTCTTGGGGCCATTTCCAAACGGCATTTGTAAAGGGCAAGGCCTTATAAATCTGAGTCTCCATGCAAATGGCTTCAATGGTTCCATACCCAACTCCATTAGTGAATGCAAGAATCTTGAGAGATTTCAAGTTCAGAACAATGGATTTTCTGGAGACTTCCCTGATGCATTATGGTCATTTCCTAATATTAAGCTCATCAGAGCTGAAAACAACAGATTCTCAGGACAAATACCTGAGTCAATATCAGGAGCTGTTCAATTGGAGCAAATTCAGCTTGACAGTAACGACTTTGCGGGGAAAATTCCGCATAGTCTTGGGTTGCTCAAGAGCTTATACAGATTCTCTGCGTCTCTGAATCATTTGAATGGTGAAATCCCTCCAAACTTCTGCGATTCCCCTGTTATGAGTATAGTGAATCTTTCCCACAATTCGCTTTCAGGTAAAATCCCAGAGCTGAAGAAATGCCGGAAACTAGTTTCATTGTCTTTGGCGGACAACAGTCTTAGTGGAGAAATACCTCCATCCCTTGCTGAGTTACCAGTGCTAACTTACCTTGATCTTTCAGAGAACAGTCTCACTGGCTCAATTCCTCAAGGGCTTCAAAACTTGAAGCTTGCTCTTTTCAATGTTTCCTTCAATCAGCTATCTGGTAGAGTACCTTACTCCCTGATTTCTGGTCTCCCTGCATCTTTTTTGGAAGGAAACCCTCAACTTTGTGGCCCTGGATTACCTACTTCCTGTTCTGATGACCCACCAAGACACCATAACGCTGCTCTCACAACTTTAACATGTGTCTTGATCTCTCTAGCCTTTCTTGTTGGAGCTGCCATTGTTGCTGCTGGATTTGCACTGTACAGGAGGAGGTCTCTCAAACAAAATCAAATAGGGATTTGGCGCTCAGTGTTCTTCTATCCTCTTAGAATTACTGAGCATGACCTACTTCTGGGGATGGATGAGAAAAGTTCAAAGGGGAATGGTGGTGTTTTTGGCAAAGTTTATGTTGTAAGTTTACCTAGTGGTGAATTAGTTGCTGTGAAGAAGATACTGAATTTTGGGAACCAGTCTTCAAAAAGTCTAAAACTTGAGGTCAAGACATTGGCGAAAATCAGGCATAAGAACATTGTGAAAATTCTGGGGTTTTGCCACTCTGATGACTCAATTCTTCTCATCTATGAGCACTTGCCTGAAGGAAGCTTAGCCGATATGCTTTCTCAGCAGAATTTTGACTTGCAGTGGGGAGTTAGATTAAGGATTGCCATTGGAGTTGCCCAAGGATTAGCATATCTTCACAAGGATTACAATCCCCATTTGCTTCACAGAAATCTCAAGTCAAGCAACATTCTGTTGGATGCAAACTTTGAGCCAAAACTCACAGATTTTGCTCTTGATCGAATTGTGGGTGAAGTTTCATTCCAATCAACTCTTGCTTCTGAAGCAGCATCTTCCTGTTATAATGCTCCAGAATATAGTTACAGTAAGAAAGCAAGTGAACAATTGGACGTGTACAGCTTTGGTGTTGTGTTGCTAGAGCTAGTGAGTGGGAGGAAGGCAGAGCAAAGAGAATCAGTGGACTCTCTTGACATTGTGAAGTGGGTTAGAAGGAAAGTGAACATCAGTAACGGTGTACTTCAAGTTCTTGACCCCAAAATATCAGATTCTTGTCAGCAGCAGATGATTGGAGCTCTGGAAATTGCTCTTCTTTGCACTTCAGTGGTGCCTGAAAAACGACCATCCATGGTAGATGTGGTTAGAGCCCTTCAGTCCCTTGAATCAAGGTTCTGCATTGAAAATTTACAAGATCCAGATGAGGAACACCACCTTCCAGTCTGAACTTCTAAATTCTAACCCCAAACACTGCCATAATTTTCTTGTTTATGTAAATCCAGCTTTATATTTCATATCTGTTCTTGATATCTGATATTTGATTTGGAGGAGATAATGTTTGGGCACATTTTGTGCAGGGCATGAGGATCTGATTATGGATTTTAATCCACAGTAATATTT 2826 0.4179 MAATLCTYLFLLSVTVSFTFLNLSSCSSEAEILLSFKASIEDTKKSLASWSNTSASHYCNWTGITCTTASVTSINLQSLNLSGDISSSICDLPNLTELNLADNLFNQPIPLHLSHCSSLQVLNLSNNLIWGTIPSQISQFGSLRVLDFSRNHIEGNIPESLGTLKNLQALSVGSNLLSGSVPSIFGNFTKLAVLDLSQNKYLVSEIPKDIGELENLQQLRLQSSGFQGEIPDSFGSLLSLTHLDLSENNLTGVVPLALVSSLKNLVSLDVSQNKLLGPFPNGICKGQGLINLSLHANGFNGSIPNSISECKNLERFQVQNNGFSGDFPDALWSFPNIKLIRAENNRFSGQIPESISGAVQLEQIQLDSNDFAGKIPHSLGLLKSLYRFSASLNHLNGEIPPNFCDSPVMSIVNLSHNSLSGKIPELKKCRKLVSLSLADNSLSGEIPPSLAELPVLTYLDLSENSLTGSIPQGLQNLKLALFNVSFNQLSGRVPYSLISGLPASFLEGNPQLCGPGLPTSCSDDPPRHHNAALTTLTCVLISLAFLVGAAIVAAGFALYRRRSLKQNQIGIWRSVFFYPLRITEHDLLLGMDEKSSKGNGGVFGKVYVVSLPSGELVAVKKILNFGNQSSKSLKLEVKTLAKIRHKNIVKILGFCHSDDSILLIYEHLPEGSLADMLSQQNFDLQWGVRLRIAIGVAQGLAYLHKDYNPHLLHRNLKSSNILLDANFEPKLTDFALDRIVGEVSFQSTLASEAASSCYNAPEYSYSKKASEQLDVYSFGVVLLELVSGRKAEQRESVDSLDIVKWVRRKVNISNGVLQVLDPKISDSCQQQMIGALEIALLCTSVVPEKRPSMVDVVRALQSLESRFCIENLQDPDEEHHLPV 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02194 883 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 668 868 - -
Bach1g02194 883 Pfam Leucine rich repeat 118 177 IPR001611 GO:0005515
Bach1g02194 883 Pfam Leucine rich repeat 215 275 IPR001611 GO:0005515
Bach1g02194 883 SUPERFAMILY Protein kinase-like (PK-like) 600 860 IPR011009 -
Bach1g02194 883 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 260 524 - -
Bach1g02194 883 Gene3D Ribonuclease Inhibitor 258 524 IPR032675 -
Bach1g02194 883 PRINTS Leucine-rich repeat signature 240 253 - -
Bach1g02194 883 PRINTS Leucine-rich repeat signature 262 275 - -
Bach1g02194 883 Pfam Leucine Rich Repeat 456 477 IPR001611 GO:0005515
Bach1g02194 883 Gene3D Ribonuclease Inhibitor 25 201 IPR032675 -
Bach1g02194 883 SUPERFAMILY L domain-like 203 519 - -
Bach1g02194 883 SUPERFAMILY L domain-like 27 297 - -
Bach1g02194 883 FunFam Leucine-rich repeat family protein 28 182 - -
Bach1g02194 883 Pfam Protein kinase domain 601 857 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach1g02194 883 Gene3D Ribonuclease Inhibitor 202 257 IPR032675 -
Bach1g02194 883 CDD STKc_IRAK 598 863 - -
Bach1g02194 883 PANTHER LEUCINE RICH REPEAT KINASE 2 177 865 - -
Bach1g02194 883 Pfam Leucine rich repeat N-terminal domain 28 66 IPR013210 -
Bach1g02194 883 Gene3D Transferase(Phosphotransferase) domain 1 668 877 - -
Bach1g02194 883 ProSiteProfiles Protein kinase domain profile. 592 867 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach1g02194 883 SMART LRR_typ_2 92 116 IPR003591 -
Bach1g02194 883 SMART LRR_typ_2 117 140 IPR003591 -
Bach1g02194 883 SMART LRR_typ_2 164 187 IPR003591 -
Bach1g02194 883 SMART LRR_typ_2 188 213 IPR003591 -
Bach1g02194 883 SMART LRR_typ_2 262 286 IPR003591 -
Bach1g02194 883 SMART LRR_typ_2 453 476 IPR003591 -
Bach1g02194 883 SMART LRR_typ_2 237 260 IPR003591 -
Bach1g02194 883 FunFam - 586 667 - -
Bach1g02194 883 Gene3D Phosphorylase Kinase; domain 1 589 667 - -
Bach1g02194 883 ProSiteProfiles Leucine-rich repeat profile. 239 260 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02194 Bach-Chr1 34127496 34130475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02194 33 863 Receptor kinase-like Gene Family AT5G06940 63.842 0.0 1045
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bach1g02194 Pkinase 3.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02194 - - gmx:100794428 1415.21