Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02139 CGGTTCCATTCCCTCCTTCCCCGTCTCCTTGCTCCTTCTAGGGCTAAGGTTTTTCTCTTTCCCTTTCGGCCGATCCTTTCCTCTACTGTTTTTAAGAGAATTAGGGTTTCATATTTTAAGGTTACCTGCACATTGTAGCTGAGTCATAGTGCATGGATCACAGAAGGCAACCCAAGGAGTCGCTCTCATACTCGAGTCTCTTCAACCTTGAGTCTTTGACGAACTTTCAACTTCCACAGCAAGATGATGATTTTGATTATTATGGGAATAGTAGTGAGGATGAGAGCAGAGATAGCCAAGGGGGGGCAGTTGCCAACCACAGTAACGGCAATATGCGTGGAAGGGAGTTAAATTTGTTAAAGAGGAGAAGGTCTCTCAACAGTGACGCTGAGGACAAGGGCATTTTGTACGGGACACACATGACAGAAGAGCGATATCGATCAATGCTAGGGGAACATATTCAGAAGTATAGAAGGAGGTTCAAGGATACTTCATCTACTCCTGCCCCAAATCGGGCTGGTCCACTTCTCAAAAGTAATGCAGTTTCAAAAACTCGAAAGTCGGGGAATGAGCACAGGGGAGGACTACATGTTCTGGAAACTACATCTGAGTGGCTAAATGATTCTAATCCTCCAAAACCTGGAAACTACCGAGATGCAGATTTCACATTGCAGTATGGAACTGATAGGATTATGTATGAACCTGCTTCTTTGGATATTGGGGATGGTATCACTTACAAAATTCCTCCAACATATGATAAGCTGGCTGTAACACTGAATCTTCCAAGTTTCTCAGACATCCAGGTCGAAGAATTTTACTTAAAGGGTACCTTGGATTTGGGTTCATTGGCTGCAATGATGACTGCTGATAAAAGAGTTGGGACTAGAAACCGAGCAGGCATGGGGGAAACCTTATCCCAATATGAATCACTTCAGGCACGATTGAAGGCCATGTCAGCTTCCAATTCAGCTCATAAATTCAGTCTGCAAATATCTGATATTAGTTTGAATTCCTCCATCCCAGAAGGGGCAGCTGGTAGTATAAAGCGATCCATTTTGTCTGAGGGTGTTGGATTGCAGGTTTATTATGTGAAGGTTTTGGAGAAAGGTGACACATATGAGATCATTGAACGAAGCCTGCCTAAGAAGCAAAAGGTAAAGAAAGACCCTTCTATGATTGAGAAGGAGGAAATGGAAAGAATTGGGAAAGTTTGGGTGAACATTGTAAGAAGGGATATACCAAAGCACCATAGGATGTTTACAGCTTTCCACCGAAAGCAACTAACTGATGCCAAGAGGTTCTCAGAGAACTGTCAGAGAGAGGTTAGAATGAAAGTGAGTAGATCTCTTAAATTGATGAGGGGGGCTGCCATTCGCACCCGGAAACTGGCTAGAGACATGTTGCTGTTCTGGAAACGAGTCGATAAAGAGATGGCAGAAATCAGGAAGAAAGAGGAAAAAGAAGCCGCCGAAGCTTTGAGGCGTGAACAGGAGCTTCGAGAAGCAAAGAGACAGCAGCAAAGGCTTAATTTTCTTATACAACAAACTGAGCTGTACAGTCACTTTATGCAGAACAAGTCAAACCTACTGTCTTCAGAAGCACCAATAGTAGATGAAAAAGTAAATGAACAGGAGACACTACTTGACTCTTCAGATGCTGGGCCTGGTGAGGAGGAAGATCCTGAAGAGGCTGAGCTGAAGAAGGAAGCTTTGAAGGCTGCTCAAGAAGCAGTCTCAAAGCAGAGAATGTTGACGGATGCTTTTGATAGTGAATGCTTGAGGCTCCGCCATGCTGCTGAAACTGATACACTTCAAGAGGAAGTTGCAGGATCTAGTAACATTGATTTGCAAACCCCATCAACCATGCCAGTGGCTTCAACCGTTCAGACTCCAGAATTGTTCAAAGGATGTCTAAAAGAATATCAGCTGAAAGGTCTTCAGTGGCTAGTTAACTGTTATGAGCAGGGTTTAAATGGTATACTTGCTGATGAGATGGGACTTGGAAAGACTATCCAGGCTATGGCCTTTTTAGCGCATTTGGCTGAGGAGAAAAATATATGGGGACCTTTTCTGGTTGTTGCACCTGCATCTGTGTTAAATAATTGGGTTGATGAACTGAAACGCTTCTGCCCTGAACTGATAAGTTTGCCTTACTGGGGTGTGGAGCGGACAGTACTTAGGAAAAGTATTAACACAAAGGAGCTTTATCGCAGGGAAGCTAAGTTCCACATTCTGATCACAAGCTACCAGCTACTAGTATCAGATGAAAAGTATTTTCGGCGTGTAAAATGGCAGTACATGGTATTAGATGAAGCCCAAGCAATCAAAAGTTCAAACAGTATAAGATGGAAGACGCTTCTCAGCTTCAATTGTCGGAACCGACTTCTTCTTACTGGTACACCTATTCAGAATAATATGGCAGAGTTGTGGGCTCTTCTTCATTTTATTATGCCAACTTTATTTGATAGCCACGAGCAGTTTAATGAATGGTTTTCAAAAGGAATTGAAAACCATGCAGAGCATGGGGGTACTTTGAATGAACATCAACTTAACAGATTGCATTCAATTCTGAAGCCTTTTATGCTGCGGCGAGTTAAGAAAGATGTAGTTTCTGAGCTGACTACAAAAACTGAGGTTACTGTGCATTGCAAGTTGAGTTCTCGTCAGCAAGCTTTCTATCAAGCAGTTAAAAACAAGATATCCCTTGCTGAGTTGTTTGATGGTAATCGGGGACATATCAATGAAAAGAAAATTCTGAATCTAATGAACATTGTTATTCAGTTGCGGAAGGTATGCAACCATCCAGAGTTGTTCGAAAGGAATGAGGGAAGCACATACTTCTACTTTGGAGAGATTCCGAAGTCCCTACCACCTCCTCCATTTGGGGAGTTGGAGGATGTTTACTATTCTGGAGGTCGCAATCCTATATCTTATGAGATACCAAAATTGTTCCATCAAGAAATTTTGCGAAGTTCTGAAATACTTAGTTCGGCTACTTGTCATGGTGTCTACAGAGAATCTTTTCAGAAACATTTTAATATTTTTAGACCAGAAAATATTTATAGATCTCTATTCTTGCAAGAGGACGAATCAGAGGAATTAAATGCGCAGTTTGTTAAAAGTGGAACTTTTGGTTTTACCCATTTAATCGGTTTGTCTCCACCGGAGGTGACGTTTCTGGCTACTGGTTCTTTTATGGAGCTACTACTATTTTCTATGATGAGATGGGAACAGAAATTTATCAATGAATTTCTAGACCTTATGGAGACTATAGATGAAGGTGCTGAATGTGGTGACCTTGATAAAGGAAAAGTGAGAGCTGTTACACGAATGCTATTGGTGCCATCAAGGTCTGAGACTTTATTTCTTCAAAGAAGATCTGGAACCGGCCCCATACATGCTCCTTTTGAGGCCTTGGTTGTCCCACATGAGGACAGGCTTCTATCCAATATAAGGCTTCTTCACTCAGCTTACACTTACATCCCTCCGGCTAGAGCTCCCCCAATTTGTGCCCACTGCTCAGACAGAAACTTCTCCTATAAAATGATCGAAGAATTACATGACCCTTGGATTATGAGGTTGCTTGTGGGATTTGCACGTACATCTGAGTATAATGGTCCTAGAAAGCCTGATGGTCCACCTCACCATTTAATTCAAGAGATTGACTCAGAACTACCAGTTTCACAGCCTGCTCTTCGGTTAACGTACAACATTTTTGGGTCTTACCCACCCGTGCGAAATTTTGACCCTGCAAAGCTGCTCACTGACTCTGGGAAGCTTCAAACACTTGATATATTATTGAAACGCTTACGGGCAGAAAATCATCGTGTTCTCTTGTTTGCTCAGATGACTAAGATGCTTAATATTCTTGAGGACTATATGAACTACAGAAAATATAGATATTTTAGACTTGATGGATCTTCTTCTATTCAGGACCGCCGAGACATGGTCAGAGACTTCCAGCATCGGAGTGATATTTTCGTGTTCTTACTGAGTACAAGAGCTGGTGGTTTGGGTATTAACTTAACAGCTGCTGACACAGTCATATTTTATGAGAGTGATTGGAATCCAACACTGGATTCACAGGCGATGGATAGAGCTCACCGTTTGGGTCAGACAAGAGATGTTACTGTCTACCGACTTATATGTAAAGAGACAGTTGAAGAGAAGATTCTTCTCAGAGCAAGCCAAAAAAGTACTGTACAAAACCTTGTCATGACAGGTGGTTCTGTCGGTGGTGATCTTTTGGCTCCGGAGGATGTTGTATCTTTGCTTCTGGATGATGCACAGTTGGAGCAGAAACTAAAGGAAATCCCTCTCCAGGGAAAAGACAAGCAAAAGAGGAAACAACCTATGAAGGGTATACGTATAAATGAAGAAGGAGATGCATCTCTGGAAGATATAACGAACACTGGAACCCAGGGTACGGGTACTGATAATGAGCTTTCTCTGGAACCAGAGGGGTCGAAGTCCAGTAGTAAGAAGAGAAAAACTGCTTCCGACAAGCAATCAAGAGTAAGGAATCCTCAGAAGGTGAATGAAGTTAGTGCTATGCCTATGGACCATGAATCGGATGATTCCCATCCAAATACTGATTCATTGGGCCAGAAACCTAAAAGACCCAAGAGGCTAAAGAAGAGTGTAAATGAGAAGTTTGATGAGTCTTTTGATGCTACGTCTACGACAGTCCCAGAGCTGACTGAATTTCCACCTCCCCATTCTAGAGACTGAATCCCCCAGGCAAGATAACACCTCTCAAGTGTTCTATAAGCAGTGGAGATCGGCTTTTTTCTTTTGGGGAGATTTCAAGTTGTAGGCTCCCATCATAATCCATAAATGTTGGAGCAAAATTCACTAAAGGCAGATGAAGGTATATATCATGTTGTACATATATGTATTAAGTACATGTAGATCCATAGATCCGCCTCTCTTATGTTACTGGGGCCTTGTACATATTCGGTTTAATGCAGATTAAAGTTTTAAATGGTGTCTTATGAAGTTTTAATGGATCAAATTAAAATAATATACTGTTAAGCAAACAGAATGTTAAAAATGTATTTAATTAAAATGTTTAAATATACTGTAAATTTTTATAGTGA 5098 0.416 MDHRRQPKESLSYSSLFNLESLTNFQLPQQDDDFDYYGNSSEDESRDSQGGAVANHSNGNMRGRELNLLKRRRSLNSDAEDKGILYGTHMTEERYRSMLGEHIQKYRRRFKDTSSTPAPNRAGPLLKSNAVSKTRKSGNEHRGGLHVLETTSEWLNDSNPPKPGNYRDADFTLQYGTDRIMYEPASLDIGDGITYKIPPTYDKLAVTLNLPSFSDIQVEEFYLKGTLDLGSLAAMMTADKRVGTRNRAGMGETLSQYESLQARLKAMSASNSAHKFSLQISDISLNSSIPEGAAGSIKRSILSEGVGLQVYYVKVLEKGDTYEIIERSLPKKQKVKKDPSMIEKEEMERIGKVWVNIVRRDIPKHHRMFTAFHRKQLTDAKRFSENCQREVRMKVSRSLKLMRGAAIRTRKLARDMLLFWKRVDKEMAEIRKKEEKEAAEALRREQELREAKRQQQRLNFLIQQTELYSHFMQNKSNLLSSEAPIVDEKVNEQETLLDSSDAGPGEEEDPEEAELKKEALKAAQEAVSKQRMLTDAFDSECLRLRHAAETDTLQEEVAGSSNIDLQTPSTMPVASTVQTPELFKGCLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWVDELKRFCPELISLPYWGVERTVLRKSINTKELYRREAKFHILITSYQLLVSDEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIENHAEHGGTLNEHQLNRLHSILKPFMLRRVKKDVVSELTTKTEVTVHCKLSSRQQAFYQAVKNKISLAELFDGNRGHINEKKILNLMNIVIQLRKVCNHPELFERNEGSTYFYFGEIPKSLPPPPFGELEDVYYSGGRNPISYEIPKLFHQEILRSSEILSSATCHGVYRESFQKHFNIFRPENIYRSLFLQEDESEELNAQFVKSGTFGFTHLIGLSPPEVTFLATGSFMELLLFSMMRWEQKFINEFLDLMETIDEGAECGDLDKGKVRAVTRMLLVPSRSETLFLQRRSGTGPIHAPFEALVVPHEDRLLSNIRLLHSAYTYIPPARAPPICAHCSDRNFSYKMIEELHDPWIMRLLVGFARTSEYNGPRKPDGPPHHLIQEIDSELPVSQPALRLTYNIFGSYPPVRNFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYFRLDGSSSIQDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDSQAMDRAHRLGQTRDVTVYRLICKETVEEKILLRASQKSTVQNLVMTGGSVGGDLLAPEDVVSLLLDDAQLEQKLKEIPLQGKDKQKRKQPMKGIRINEEGDASLEDITNTGTQGTGTDNELSLEPEGSKSSSKKRKTASDKQSRVRNPQKVNEVSAMPMDHESDDSHPNTDSLGQKPKRPKRLKKSVNEKFDESFDATSTTVPELTEFPPPHSRD 1525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02139 1525 SMART ultradead3 583 776 IPR014001 -
Bach1g02139 1525 MobiDBLite consensus disorder prediction 1467 1487 - -
Bach1g02139 1525 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 815 1394 IPR027417 -
Bach1g02139 1525 Gene3D - 823 892 IPR027417 -
Bach1g02139 1525 FunFam DNA helicase INO80-like protein 1179 1431 - -
Bach1g02139 1525 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 570 813 IPR027417 -
Bach1g02139 1525 MobiDBLite consensus disorder prediction 1437 1457 - -
Bach1g02139 1525 MobiDBLite consensus disorder prediction 43 62 - -
Bach1g02139 1525 MobiDBLite consensus disorder prediction 29 64 - -
Bach1g02139 1525 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1211 1361 IPR001650 -
Bach1g02139 1525 Pfam SNF2-related domain 602 887 IPR000330 GO:0005524|GO:0140658
Bach1g02139 1525 FunFam Putative DNA helicase INO80 559 835 - -
Bach1g02139 1525 MobiDBLite consensus disorder prediction 493 514 - -
Bach1g02139 1525 Gene3D - 582 822 IPR038718 -
Bach1g02139 1525 Pfam DNA-binding domain 348 477 IPR020838 GO:0003677
Bach1g02139 1525 MobiDBLite consensus disorder prediction 1413 1436 - -
Bach1g02139 1525 Coils Coil 425 464 - -
Bach1g02139 1525 MobiDBLite consensus disorder prediction 1386 1525 - -
Bach1g02139 1525 Gene3D - 1184 1425 IPR027417 -
Bach1g02139 1525 MobiDBLite consensus disorder prediction 1386 1412 - -
Bach1g02139 1525 ProSiteProfiles DBINO domain profile. 353 478 IPR020838 GO:0003677
Bach1g02139 1525 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 599 768 IPR014001 -
Bach1g02139 1525 CDD SF2_C_SNF 1199 1331 - -
Bach1g02139 1525 Pfam Helicase conserved C-terminal domain 1211 1320 IPR001650 -
Bach1g02139 1525 PANTHER HELICASE SRCAP-RELATED 68 520 - -
Bach1g02139 1525 SMART helicmild6 1237 1320 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02139 Bach-Chr1 33625947 33637640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02139 640 886 RAD5 or RAD16-like Gene Family AT1G61140 25.000 3.84e-12 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Bach1g02139 SNF2_N 1.9e-66 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02139 K11665 - gmx:100780615 2390.15