Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02127 ATGGAAATTGATGAGGAAAGCACTGTGCCAGTTACTTCCGCAGAATCCTGTGTCACTGCCTCTGATGGTCAAAGTCTGGTCTCTCCTGTTCATGCAATTCCACCCCAGCCTACACAACCTATAATTTCACCAGCAATCCCACCTCCTGTTATGCCTCCCATAGCTCCAATTCCTACTATTCCTCCAGCTCCAGTTCTCCGCCCGTTGGCATCTCTTCCTGCCCGCCCACCCGTTATTAGGCCACCTGTTTCCCAAAATGGTGAAGTATCAAGTGATTCTGATTCAGACCATGATGATTCTCTCCCCGGGGTTAACCAGGGGGCAGGGGAATACGAAATATCAGAAGAGAGTAGGTTGGTAAGAGAGCGGCAGGAAAAAGCAATGCAAGAACTCATGATGAAGAGGCGCGCTGCTGCTTTAGCTGTTCCTACAAATGACATGGCAGTGCGGGCTCGACTTCGCCGTCTTGGTGAGCCCATTACACTTTTTGGTGAACGAGAAATGGAGAGAAGAGACAGGTTGCGAATGATTATGGCAAAGCTGGATGCTGAAGGTCAGCTGGAAAAGCTGATGAAAGCTCATGAGGACGAAGAGGCCGCAGCTTCTGCTCCAAAAGATGAGGTGGAGGAAGATATACAGTATCCCTTTTATACAGAAGGGTCCAAGGCTCTCCTGGATGCAAGAATTCATATCGCTAAGTATTCTGTAGGAAGAGCAGCATTGCGTCTTCAACGTGCCCAGAGAAAAAGAGATGATCCAGATGAAGACGTGGATGCAGAAATGGACTGGGCACTAAAGCAGGCTGGGAATTTGTCTCTTGATATCAGTGAGATTGGAGATGATCGGCCGCTTACTGGTTGCTCATTCTCATCAGATGGAAAAATGATTGCTACCTGTTCTCTTAGTGGAGCTTCCAAATTGTGGAGCATGCCTCAATTGAAAAAGGTTTCTACCTTAAAGGGACATACTGAGCGTGCTACTGATGTTGCTTATTCTCCAATGAACAATCATTTAGCAACTGCCTCTGCTGATCGGACTGCAAGGTATTGGCATGAAGACGGTTCTCTATTAAAGACATTTGAGGGTCATCTGGACCGTCTTGCCCGTATTTCCTTCCATCCATCAGGGAAGTACTTGGGCACCGCTAGCTTTGACAAGACATGGAGATTATGGGACATAGAAACAGGAGAGGAGTTGCTTCTTCAAGAAGGCCACAGTAGGAGTGTATACGCTTTAGCTTTCCACATTGATGGATCATTAGCTGCATCTTCTGGACTGGATGCACTGGCTCGTGTTTGGGACCTTCGTACTGGCAGAAGTATACTTGCACTGGAAGGTCATGTTAAGCCGGTTCTTGGCATCAGTTTTTCACCCAATGGGTATCATTTAGCCACAGGTGGTGAAGATAACACTTGTCGCATTTGGGATTTGAGGAAGAAGAAATCTTTGTACGTCATTCCAGCTCACTCAAATTTAATATCACAAGTCAAATTTGAGCCACAAGAGGGTTACTTTTTGGTAACTTCCTCATATGACATGACAGCTAAGGTTTGGTCAGCCCGCGATTTTAAGCCTGTGAAGACGCTATCTGGGCATGAAGCGAAAGTTACTTCTGTGGATGTTGTCTCAGATGGTCGTTATATTGCTACTGTCTCCCATGATAGGACCATAAAACTGTGGTCCAGCAGTGAACAAGCTATGGACATTGACTGA 1713 0.4647 MEIDEESTVPVTSAESCVTASDGQSLVSPVHAIPPQPTQPIISPAIPPPVMPPIAPIPTIPPAPVLRPLASLPARPPVIRPPVSQNGEVSSDSDSDHDDSLPGVNQGAGEYEISEESRLVRERQEKAMQELMMKRRAAALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRMIMAKLDAEGQLEKLMKAHEDEEAAASAPKDEVEEDIQYPFYTEGSKALLDARIHIAKYSVGRAALRLQRAQRKRDDPDEDVDAEMDWALKQAGNLSLDISEIGDDRPLTGCSFSSDGKMIATCSLSGASKLWSMPQLKKVSTLKGHTERATDVAYSPMNNHLATASADRTARYWHEDGSLLKTFEGHLDRLARISFHPSGKYLGTASFDKTWRLWDIETGEELLLQEGHSRSVYALAFHIDGSLAASSGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKKKSLYVIPAHSNLISQVKFEPQEGYFLVTSSYDMTAKVWSARDFKPVKTLSGHEAKVTSVDVVSDGRYIATVSHDRTIKLWSSSEQAMDID 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02127 570 MobiDBLite consensus disorder prediction 9 23 - -
Bach1g02127 570 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 529 570 - -
Bach1g02127 570 ProSitePatterns Trp-Asp (WD) repeats signature. 379 393 IPR019775 -
Bach1g02127 570 ProSiteProfiles Trp-Asp (WD) repeats profile. 360 401 IPR001680 GO:0005515
Bach1g02127 570 CDD WD40 283 561 - -
Bach1g02127 570 Gene3D - 120 190 IPR036285 -
Bach1g02127 570 ProSitePatterns Trp-Asp (WD) repeats signature. 463 477 IPR019775 -
Bach1g02127 570 ProSiteProfiles Trp-Asp (WD) repeats profile. 486 528 IPR001680 GO:0005515
Bach1g02127 570 SUPERFAMILY WD40 repeat-like 277 560 IPR036322 GO:0005515
Bach1g02127 570 FunFam U4/U6 small nuclear ribonucleoprotein PRP4-like protein 404 570 - -
Bach1g02127 570 Pfam WD domain, G-beta repeat 354 392 IPR001680 GO:0005515
Bach1g02127 570 Pfam WD domain, G-beta repeat 524 561 IPR001680 GO:0005515
Bach1g02127 570 Pfam WD domain, G-beta repeat 442 476 IPR001680 GO:0005515
Bach1g02127 570 Pfam WD domain, G-beta repeat 314 350 IPR001680 GO:0005515
Bach1g02127 570 Pfam WD domain, G-beta repeat 403 434 IPR001680 GO:0005515
Bach1g02127 570 Pfam WD domain, G-beta repeat 482 519 IPR001680 GO:0005515
Bach1g02127 570 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 319 350 - -
Bach1g02127 570 MobiDBLite consensus disorder prediction 1 23 - -
Bach1g02127 570 SUPERFAMILY PRP4-like 127 182 IPR036285 -
Bach1g02127 570 ProSitePatterns Trp-Asp (WD) repeats signature. 421 435 IPR019775 -
Bach1g02127 570 PANTHER WD40 REPEAT PROTEIN 102 562 - -
Bach1g02127 570 SMART WD40_4 353 392 IPR001680 GO:0005515
Bach1g02127 570 SMART WD40_4 312 351 IPR001680 GO:0005515
Bach1g02127 570 SMART WD40_4 479 519 IPR001680 GO:0005515
Bach1g02127 570 SMART WD40_4 522 561 IPR001680 GO:0005515
Bach1g02127 570 SMART WD40_4 437 476 IPR001680 GO:0005515
Bach1g02127 570 SMART WD40_4 395 434 IPR001680 GO:0005515
Bach1g02127 570 SMART WD40_4 268 309 IPR001680 GO:0005515
Bach1g02127 570 ProSiteProfiles Trp-Asp (WD) repeats profile. 444 485 IPR001680 GO:0005515
Bach1g02127 570 MobiDBLite consensus disorder prediction 76 116 - -
Bach1g02127 570 Gene3D - 263 444 IPR015943 GO:0005515
Bach1g02127 570 ProSiteProfiles Trp-Asp (WD) repeats profile. 529 561 IPR001680 GO:0005515
Bach1g02127 570 SMART pr04_2 144 197 IPR014906 -
Bach1g02127 570 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 360 397 - -
Bach1g02127 570 ProSiteProfiles Trp-Asp (WD) repeats profile. 402 443 IPR001680 GO:0005515
Bach1g02127 570 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 402 439 - -
Bach1g02127 570 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 444 478 - -
Bach1g02127 570 Pfam pre-mRNA processing factor 4 (PRP4) like 149 175 IPR014906 -
Bach1g02127 570 Coils Coil 180 200 - -
Bach1g02127 570 Gene3D - 445 568 IPR015943 GO:0005515
Bach1g02127 570 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 486 519 - -
Bach1g02127 570 PRINTS G protein beta WD-40 repeat signature 463 477 IPR020472 -
Bach1g02127 570 PRINTS G protein beta WD-40 repeat signature 379 393 IPR020472 -
Bach1g02127 570 PRINTS G protein beta WD-40 repeat signature 548 562 IPR020472 -
Bach1g02127 570 ProSiteProfiles Trp-Asp (WD) repeats profile. 319 350 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02127 Bach-Chr1 33526468 33529429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02127 364 560 U-box Gene Family AT2G33340 23.529 6.84e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02127 K12662 - gmx:100788948 864.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g02127 1 33526468 33529429 Bach1g02127 1 33526468 33529429 ECH