LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach1g02075	ATGGGACTCTGTCATGGAAAACCCATTGAAATCTCACAAACTCAAGGTGAAAACCCAGTATTCCCCGGTGATAAAGACGGGTTACCAAGTTCTCACACAGGCAAATCCTCAAACTTTCCATTTTACAGCCCAAGTCCCCTACCAAGTCTATTCAAGAACTCGCCGGCAAACTCCAGTTTGAGCTCAACTCCTTTGCGCTTTTTCAAGCGCCCATTTCCTCCTCCCTCTCCGGCCAAGCACATTCGGGCCCTGCTTGCTCGACGGCATGGTTCAGTGAAGCCCAATGAGGCCTCAATTCCTGAAGGCAGCGAATGTGAAGTTGGATTGGACAAAAATTTCGGTTTTTCAAAGCAGTTTGTGGCTTATTACGACCTTGGAGAAGAGATAGGACGTGGGCATTTTGGGTATACTTGCTCAGCCAAGGGAAGGAAGGGAAACTTGAAGGGGCAGGATGTGGCTGTCAAAGTCATTCCAAAATCAAAGATGACAACAGCTATTGCTATAGAGGATGTACGAAGAGAAGTAAAAATATTGCGGGCTTTAACAGGACATAAGAACCTGGTGCAGTTCTATGAAGCCTATGAGGACGATGATAATGTTTATGTAGTTATGGAGTTATGCAAAGGAGGTGAACTGCTAGATAGGATACTTTCCAGGGGTGGTAAGTATTCTGAAGAGGATGCCAAGATCGTTATGATTCAAATATTAAGTGTGGTGGCCTTCTGTCATCTTCAGGGTGTGGTTCATCGCGATCTCAAGCCAGAGAATTTTCTTTTTACTTCTAAGGATGAAAATTCCACGTTGAAAGCCATTGATTTTGGACTATCAGACTATGTAAAGCCAGATGAAAGATTGAATGACATTGTCGGAAGTGCATATTATGTAGCTCCCGAAGTTTTACACAGATCTTATGGGACAGAAGGTGACATGTGGAGCATTGGTGTAATTGCTTATATCCTTTTATGTGGAAGCAGACCCTTTTGGGCCCGGACAGAATCTGGCATATTTCGAGCTGTCTTGAAGGCAGATCCAAGTTTTGATGAAGCTCCTTGGCCTTCTTTATCTGCTGATGCAGTAGATTTTGTAAAGAGGCTACTTAATAAGGATTACCGTAAAAGATTAACTGCAGCTCAGGCTCTTTGTCATCCTTGGCTGGTGAATCGTCAGGAAGATATAAAGATACCTTTGGATATGATAATTCACAAGCTTGTGAAAGCTTACATATGTTCATCGTCTTTGCGCAAATCAGCATTAGGGGCTTTGGCAAAGACATTGACAGTAGCTCAGCTAGCTTATCTCAGAGAACAATTTACACTGTTAGGTCCAAACAAAAGCGGATTTATCTCTATGCAGAACTTTAAGACGGCTGTTCTGAGAAGCTCCACTGACGCATCAAAGGAATCACGGGTCTCAGATTACGTTCACATGGTTAGCTCCATCCAGTATAGGAAATTAAATTTTGAGGAATTTTGTGCTGCTGCTATAAGTGTGCACCAACTAGAGGGAATGGCCAGCTGGGAGCATCATGCAACACGTGCCTATGAGCTGTTTGACAAGGATGGAAATAGACCAATTATGATTGAAGAGCTGGCCTCGGAACTGGGGCTTAGCCCATCAGTACCTGTTCATGTAGTACTCAAAGATTGGATAAGACACTCAGATGGGAAGCTTAGTTTCTTGGGGTTTGTCAGACTTCTGCATGGTCTTTCTTCCCGCACATTTCAGAAGGCTTGA	1734	0.4366	MGLCHGKPIEISQTQGENPVFPGDKDGLPSSHTGKSSNFPFYSPSPLPSLFKNSPANSSLSSTPLRFFKRPFPPPSPAKHIRALLARRHGSVKPNEASIPEGSECEVGLDKNFGFSKQFVAYYDLGEEIGRGHFGYTCSAKGRKGNLKGQDVAVKVIPKSKMTTAIAIEDVRREVKILRALTGHKNLVQFYEAYEDDDNVYVVMELCKGGELLDRILSRGGKYSEEDAKIVMIQILSVVAFCHLQGVVHRDLKPENFLFTSKDENSTLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEGDMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSADAVDFVKRLLNKDYRKRLTAAQALCHPWLVNRQEDIKIPLDMIIHKLVKAYICSSSLRKSALGALAKTLTVAQLAYLREQFTLLGPNKSGFISMQNFKTAVLRSSTDASKESRVSDYVHMVSSIQYRKLNFEEFCAAAISVHQLEGMASWEHHATRAYELFDKDGNRPIMIEELASELGLSPSVPVHVVLKDWIRHSDGKLSFLGFVRLLHGLSSRTFQKA	577

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach1g02075	577	Gene3D	-	408	568	-	-
	Bach1g02075	577	PANTHER	SERINE/THREONINE-PROTEIN KINASE	110	554	-	-
	Bach1g02075	577	Gene3D	Phosphorylase Kinase; domain 1	116	212	-	-
	Bach1g02075	577	FunFam	Calcium-dependent protein kinase SK5	295	390	-	-
	Bach1g02075	577	FunFam	CDPK-related kinase 1	116	211	-	-
	Bach1g02075	577	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	247	259	IPR008271	GO:0004672\|GO:0006468
	Bach1g02075	577	SUPERFAMILY	EF-hand	415	568	IPR011992	-
	Bach1g02075	577	ProSiteProfiles	Protein kinase domain profile.	123	385	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach1g02075	577	Gene3D	Transferase(Phosphotransferase) domain 1	213	407	-	-
	Bach1g02075	577	SMART	serkin_6	123	385	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach1g02075	577	CDD	STKc_CAMK	123	384	-	-
	Bach1g02075	577	FunFam	CDPK-related kinase 1	423	495	-	-
	Bach1g02075	577	Pfam	Protein kinase domain	123	385	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach1g02075	577	SUPERFAMILY	Protein kinase-like (PK-like)	118	414	IPR011009	-
	Bach1g02075	577	FunFam	CDPK-related kinase 3	115	287	-	-
	Bach1g02075	577	ProSiteProfiles	EF-hand calcium-binding domain profile.	428	463	IPR002048	GO:0005509
	Bach1g02075	577	ProSitePatterns	Protein kinases ATP-binding region signature.	129	155	IPR017441	GO:0005524
	Bach1g02075	577	MobiDBLite	consensus disorder prediction	1	40	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach1g02075	Bach-Chr1	33127628	33131491	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach1g02075	1	575	EF-hand Containing Proteins	AT3G50530	66.403	0.0	841

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CAMK_CDPK	Bach1g02075		Pkinase	2.9e-69	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach1g02075	K13412		-	cave:132162604	1033.09