Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02063 ATGACCATGACCATGGAAGCAGAAGACTCTATCATCCTAATGGACCCAGAGGTCCAATCCTCTCAAAGTTCGCAGTTGCAATCGCAATCCGAATCGTCTTTGTCCGAAAGTTACCTACTTGGCTTTGTCATTGCCAACATTGTTGGGATTAAATACTATTCGGGCACCATCACTGGCCGCGAAATGGTGGGTCTCGTTCGTGAACCTCTCAATCCGTATGACGAAAACGCCATTAAGGTACTCAACACTAGAAGTGATCAGGTTGGACATATTGAGCGCTCTGTTGCCGAGGTACTATCACCTTTGATAGACTCTAACCTAATTACCATTGAAGGCATTGTGCCCAATTCGCGCGCCGCCAATAACCGCATTAGACTTCCCTGTCAAATTCACATCTTTGCGGCGATTGAGGCCTTTCCCCGCGTGAAAGATGTCATTTCACATGGTGGGCTGAACTTAATTTCGAATACTGATGCATCGTTTGCGTTATCAGCGGCTATGGCTGTGAAGGAAAAAAAAGCTCCCATGAAACTTAAGAGTGTAGATGAGATTTTCAAGTTGGTTGATGAGAATGTCAGCAAGAAGTGTGCATTTGAATCGTTGGAGCCCCCTAAAACTGTGATTAAGTCGAAGCTTTTTGTGCATCAAAAGGAAGGGCTGGGTTGGTTAGTTCATAGGGAAAATTCTGGTGAACTGCCACCTTTTTGGGAAGAGAAAGATGGAGTCTATGTGAATGTGTTAACTAATTATCAGACAGGTACAAGGCCGGAGCCTTTGCGAGGTGGAATTTTCGCTGATGATATGGGATTAGGCAAGACCTTAACCTTACTTTCTTTGGTTGCTTTTGATAAAGATCCTAGTGCTTGTACTTCTTCAATAGATATTGGGAGCGTAGATGTAGGAAAACATGATGAGATGATGGAGCAGAATGAGGGATTGTCTGTCTCAGGTGGTAAGAAGGATAAGAGGGGAAGACCGAGAAAAGTTGTCACTGGATCACTGAAAAGACGCAAGACTGATTCTATTTCTTCTGGGAGCCATGTTAAAAATGCAGATGAATCTGTTGGCATTGGCATATCTTCTACTAATATGGAAACGAAGGCAACATTGGTCGTGTGCCCCCCTTCTGTGTTTTCAACTTGGATAAGTCAGCTAGAAGAACATACTACACCTGGCTCATTGAAGACATACATGTATTATGGGGATAGAAGGACTCAAGATGCTGAAGAATTGAAGAAGTATGATATTGTGTTGACTACATATACCACTTTAGGTGGCGAAGAACATTGGCCAAACTCACCAGTAAAGAAAGTAGAATGGTGGAGAATCATTTTGGATGAAGCACACATAATTAAGAATGTGAATGCTCAACAAAGTCGAGTAGTCACTAATCTGATTGCTAAGCGGAGGTGGGCTGTTACTGGGACGCCAATTCAAAATGGTTCGTATGATTTGTTTTCTCTAATGGCATTTTTACGTTTTGAACCATTTTCAGTGAAGAGCTATTGGCAGAGCTTGGTGCAACGTCCTCTTGGTCAGGGTGACCACAGAGGACTCTCACGATTGCAGGTTTTGATGGCAACAATTTCACTGCGAAGAACAAAAGACAAGGAATTGGTAGGACTGCCACCGAAAACCGTGGAGACTTACTGTGTTGAACTTTCTGGTGAAGAACGTAAACTTTATGATCGGATGGAAGCCGAAGCAAAGAATATACTGCAGGGTTATATCAACAACGGAAGTCTAGTGCGCAACTACTCCACTGTACTAAGTGTAATATTACGCCTCCGGCAAATATGTACTGATTTGGCATTGTGCCCCTCAGATCTCAAATCACTACTCCCTTCAAATAATATTGAAGATGTTTCCAATAACCCAGAATTGCTGCAAAAGTTACTTGAGGTGCTACAAGATGGTGAAGATTTTGACTGTCCAATTTGTATTTCTCCACCAACTGATATTGTCATTACATGCTGTGCTCACATTTTCTGCCAAGCCTGTATTGTGAAAACACTACAGCGCAGCATATCCTGTTGTCCACTCTGCCGTCGTCCTCTCTCTGAATCTGACCTGTTCTCAGCCCCACAACCTACTGAGGCAGATGGTACTGGAGCATCCTCCTGTGGATCAAGCTCATCTTCCAAAGTATCTGCGCTGATAAAACTTCTTATAGAATCAAGGGATCAAGTTCCAGGTGCAAAATCAGTTGTATTTTCACAATTTCGCAAGATGTTGTTGTTACTGGAAGAGCCTCTTAAAGCAGCTGGTTTCAAGACTTTGCGTCTTGATGGATCAATGAATGCTAAACGAAGGGCTCAAGTGATAGGAGAATTTGGAGCCACAGGAACAGAGGAGGCCACGGTTCTGCTTGCAAGCCTTAAGGCTTCAGGTGCAGGTATAAATCTTACAGCTGCTTCCAGAGTGTACTTGTTTGAGCCATGGTGGAATCCAGCAGTGGAGGAACAAGCAATGGATCGCGTCCATCGCATCGGACAGAAGCAGGATGTGAAGATTGTCAGGTTGATTGCTCAAAACAGCATTGAAGAGAGGATATTAGAGCTGCAGGAGAAGAAAAAGCAACTTGCTAAGGAAGCATTTGGAAAGAAAGGAGCGAAGGGTCGGAGGGAAGTTGGTGTGGATGATCTCCGTATGCTCATGTCCTTGTAAGTTGTACATCAGCGTTACAATCACAGATTTAAATGCATGTATATGTTTTGTGTTTCCTACTTCTGTAAGAAACTTGTGTACGTCTTTTTGTTTTAAGACAAGGAGCAATTCTG 2780 0.4324 MTMTMEAEDSIILMDPEVQSSQSSQLQSQSESSLSESYLLGFVIANIVGIKYYSGTITGREMVGLVREPLNPYDENAIKVLNTRSDQVGHIERSVAEVLSPLIDSNLITIEGIVPNSRAANNRIRLPCQIHIFAAIEAFPRVKDVISHGGLNLISNTDASFALSAAMAVKEKKAPMKLKSVDEIFKLVDENVSKKCAFESLEPPKTVIKSKLFVHQKEGLGWLVHRENSGELPPFWEEKDGVYVNVLTNYQTGTRPEPLRGGIFADDMGLGKTLTLLSLVAFDKDPSACTSSIDIGSVDVGKHDEMMEQNEGLSVSGGKKDKRGRPRKVVTGSLKRRKTDSISSGSHVKNADESVGIGISSTNMETKATLVVCPPSVFSTWISQLEEHTTPGSLKTYMYYGDRRTQDAEELKKYDIVLTTYTTLGGEEHWPNSPVKKVEWWRIILDEAHIIKNVNAQQSRVVTNLIAKRRWAVTGTPIQNGSYDLFSLMAFLRFEPFSVKSYWQSLVQRPLGQGDHRGLSRLQVLMATISLRRTKDKELVGLPPKTVETYCVELSGEERKLYDRMEAEAKNILQGYINNGSLVRNYSTVLSVILRLRQICTDLALCPSDLKSLLPSNNIEDVSNNPELLQKLLEVLQDGEDFDCPICISPPTDIVITCCAHIFCQACIVKTLQRSISCCPLCRRPLSESDLFSAPQPTEADGTGASSCGSSSSSKVSALIKLLIESRDQVPGAKSVVFSQFRKMLLLLEEPLKAAGFKTLRLDGSMNAKRRAQVIGEFGATGTEEATVLLASLKASGAGINLTAASRVYLFEPWWNPAVEEQAMDRVHRIGQKQDVKIVRLIAQNSIEERILELQEKKKQLAKEAFGKKGAKGRREVGVDDLRMLMSL 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02063 888 MobiDBLite consensus disorder prediction 693 712 - -
Bach1g02063 888 SMART ultradead3 208 502 IPR014001 -
Bach1g02063 888 Gene3D - 31 153 - -
Bach1g02063 888 Coils Coil 844 864 - -
Bach1g02063 888 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 253 495 IPR014001 -
Bach1g02063 888 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 534 886 IPR027417 -
Bach1g02063 888 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 622 709 IPR013083 -
Bach1g02063 888 SMART helicmild6 746 831 IPR001650 -
Bach1g02063 888 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 193 533 IPR027417 -
Bach1g02063 888 SMART ring_2 644 682 IPR001841 -
Bach1g02063 888 Gene3D - 543 887 IPR027417 -
Bach1g02063 888 Pfam Zinc finger, C3HC4 type (RING finger) 644 682 IPR018957 GO:0046872
Bach1g02063 888 MobiDBLite consensus disorder prediction 309 349 - -
Bach1g02063 888 CDD SF2_C_SNF 718 842 - -
Bach1g02063 888 Gene3D - 186 294 IPR038718 -
Bach1g02063 888 SUPERFAMILY RING/U-box 629 689 - -
Bach1g02063 888 Pfam Helicase conserved C-terminal domain 715 831 IPR001650 -
Bach1g02063 888 PANTHER TRANSCRIPTION TERMINATION FACTOR 2-RELATED 162 886 - -
Bach1g02063 888 ProSitePatterns Zinc finger RING-type signature. 659 668 IPR017907 -
Bach1g02063 888 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 718 883 IPR001650 -
Bach1g02063 888 ProSiteProfiles Zinc finger RING-type profile. 644 683 IPR001841 -
Bach1g02063 888 SMART HIRAN_2 40 136 IPR014905 GO:0003676|GO:0008270|GO:0016818
Bach1g02063 888 CDD RING-HC_HLTF 639 691 - -
Bach1g02063 888 Gene3D - 350 534 IPR038718 -
Bach1g02063 888 Pfam SNF2-related domain 215 603 IPR000330 GO:0005524|GO:0140658
Bach1g02063 888 Pfam HIRAN domain 41 134 IPR014905 GO:0003676|GO:0008270|GO:0016818
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02063 Bach-Chr1 33043141 33048010 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02063 27 888 RAD5 or RAD16-like Gene Family AT5G05130 65.278 0.0 1136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Bach1g02063 SNF2_N 5.4e-74 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02063 K15711 - jre:108979720 1196.8