Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02039 ATGGCATCTGATCCATGGCTGCGAGAGTTTAATGAGGCATCAAAATTATCAGAAGAAATAAAGGGTATGATTACTGCAAGGAGTTCACTGCCTCCTTCTGGGCCAGAAACACAGCGTCATCTATCAGCAGCTAGGAGAAAGATAACTATATTAAGGACCAAACTTGAAACTCTGCAGTCACTTCTCTCAACACTTCCGAGCAAGCAGCCAATAACAGGAAAAGAGATTAATCGACGGCAAGACTTGCTCTCTAATTTAAATTCCAAAACCAACCAGATGGCTACATCTCTCAACATGTCTGGCTTTGCTAATAGAGATAGCTTGCTTGGACCTGATAAAAGGTTAGAAGAAGTCATGAACAAAGCAAGTGGCTTGGACAACCAGGGTCTTGTTGGCTTTCAACGGCAAATCATTAAAGAACAAGATGGAGATCTTGAAAAGTTAGAGGAGACAGTTATAAGCACAAAACACATCGCATTGGCAGTTAATGAGGAACTTGGCCTACAAACTAGACTTCTGGATAGTATAGACCAGCATGTGGATTCAACAAATTCCCGCCTACAGATGGTACAAAAGAGATTGGCCATACTGAACAAGCGCACTAAGGGTGGTTGTTCTTGTATAATCCTGATAATCCTTGCTATCGTCGCTCTGGTAGTTGTCGCATGGTTACTGATTAAATATTTGTAGCACTGTTTATTTTGTAGTGCTACATTTTAAAAATCAAAACAGTAATACGCATATCTTATCTTATGATTGCTCGCGTTGGATTTGGTTTTGTGAGACTTTCATGTTCTGCTTGATATGCATCAATCGGTATCCGTTTTTTTACTCAAGAACCTGCAGTTATGGCGGAGGCGCCAGGGACAACTTTGTATATAAGCAAATATCTTTTATTCATTGGATTCCACTACCAGGTTCAATTTCTT 929 0.4015 MASDPWLREFNEASKLSEEIKGMITARSSLPPSGPETQRHLSAARRKITILRTKLETLQSLLSTLPSKQPITGKEINRRQDLLSNLNSKTNQMATSLNMSGFANRDSLLGPDKRLEEVMNKASGLDNQGLVGFQRQIIKEQDGDLEKLEETVISTKHIALAVNEELGLQTRLLDSIDQHVDSTNSRLQMVQKRLAILNKRTKGGCSCIILIILAIVALVVVAWLLIKYL 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02039 229 Pfam SNARE domain 172 221 IPR000727 -
Bach1g02039 229 SUPERFAMILY SNARE fusion complex 126 197 - -
Bach1g02039 229 PANTHER SYNTAXIN 22 213 IPR045242 -
Bach1g02039 229 Coils Coil 180 200 - -
Bach1g02039 229 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 135 197 IPR000727 -
Bach1g02039 229 Coils Coil 41 61 - -
Bach1g02039 229 Gene3D - 137 199 - -
Bach1g02039 229 CDD SNARE_Qc 138 195 - -
Bach1g02039 229 ProSitePatterns Syntaxin / epimorphin family signature. 141 180 IPR006012 GO:0005484|GO:0006886|GO:0016020
Bach1g02039 229 FunFam syntaxin-51 isoform X2 137 199 - -
Bach1g02039 229 SMART tSNARE_6 130 197 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02039 Bach-Chr1 32857959 32859747 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02039 2 229 SNARE and Associated Proteins AT1G79590 60.870 8.46e-101 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02039 K08503 - nnu:104589757 325.479