Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02012 ATGGAGTTCACAAAGGTTCCACCAAAAGAGGCATGCACTTCTCTACTGGTAAAGAGGAGAGTGAGGATAAAACTTGAGCCAATGCCCAAAAGGGGCAATGGATCTAAAGGAAAGAGAATGTCACTTCTAACTAATCATTTTAAAGTTGAAATTAGCAATTTGTCTGGCCATTTCTATTGCTACAATGTTCAAATACTACATGAAGATGGGTACCCAGTTAACAAAAGAGCAATTAAAAGAAGAATAATTGATGGAATTAATGGGACTTATGCTACTGAGCTTGCTGGAAACCATTTTGCTTATGATGGGAATGAGAGGTTGTACACTGTTGGATCCCTCCCTCAGAAGAAAATGGAGTTCTTCACGGTGCTGGACAATGTTTCAGCAAAGAGAGGTGAAAAAAATGGCAACTTTGTTGAGGGGGAAGATCCTGAAAGGTACAGTAGAAAGAGGCTGAAGCATGCCTCCAAGAGCAGGAGTTACAAAGTTGAAATAAGTCTTGCCAATAAAATCCCAATACAAGCCATTGCAAATGCCCAAAATTTGCAAGAATCAGGAAACTTTGATGAAGCTTTGGTTGTGCTGAACACCATTTTAAGGCATAATGCGGCAAGAAAGGGATTTTATTCAAGTTTTCAGGTCACCCAAGGAGGATTATCTCTAAATTTTGGTGTGTCCAACACTACAATTATACAACCTGGGCCGGTGATTGATTTTGTTCTTTCCAACCAAAATGTGAGACATTGTCATCAAATTGATTGGAATAAGGCAAAGCGAACACTGAAGAACTTGAAAATAAAGGTGGCAACCTCTCACATAGAATGCAGAATTACTGGTTTGAGTGAGAAATCCTGCAAACAACAAAGGTTCTTTCTCAATAAGAAGGACGATAACCATGTTACCCAGATCACAGTATATGATTACTTTGTAGAACATCATAATATGGTGCCAAACAAATCTGCAGACTTACCATGCATCAACGTGGGTAATCCAAAAAAGCCAACCTATTACCCTCTGGAGCTTTGTTCATTGCTTCCTTTACAAAGATATACAAAGCAATTTTCTCCTCAACAAAGACGTTCAATGATTGAAAAATTAAGCCTAAAGCCCCATCAAATGATAAAAGTCATAAAAGATGCAATGAAGAGCAATAAATATAACCATGACCCACTTATTCATTCCTGCGGCATATCAATCAACAAGCACTTTACTCAGGTTGAAGGCCGTGTCCTGCCAGCTCCAAGGCTAAGAGTTGGAGATGGGAAAGAACTCATTCCCCAAAATGGGAGATGGAGCTATTCCAATAAGAAACTCTTTGAACCTGCTAAAATCAAACACTGGGCAGTAGTAAACTTCTCCTCTGGCTTGAAAATTAGCTATCTATGTGAATATCTAAGAAAAGTGGGACAAATGAGAGGAATGGCCATAGATTCCCCCAAAACCGTTCTGGAAGAAAATCGTGAGTTCATAAATGCACCACCTTTTGTTCGAGTGGAGAAGATGTTTGAACAATATACAAAATTTTCCAGCAATGAACCTGATTACTTTGTTCTGTGTCTACTTCCTCAAAGGATGAACATTCTGAAAATCTGCGAGCAAACTCTTGCAAATGTTATCTTAAAGATTAATGCAAAACTTGGAGGCTTAAATTCATTGTTAGCCATAGAGAACATTCCTATAGTTTCCAAGGTTCCTACAATGATTTTTGGGATGAGTCTGTCAAACAGTTCTCCTCACCGGGCATCGATTGCTTCAGTAGTTGCTTCTAGGCAATGGCCTCTGATTTCACGTTATAAAGCATCAGCTCGCATACAGCAACCAAGTTCAAAACTCATTGATACCCTTTTTATGCCAGAACCAGAAGGAAAGGATAATGGCACAGTCAGGTGCAACTATCTTTTTCCCAAAGACAGGCTTGCCTGCTTTGAAGAATTTGGTTTACTAAAACTTGATCAAGACATTGTTCTTACAACTGAGTTTCAATCAAATTTCAATTTTAGAATTTTATGTCATTTTTCTCCATGCCAGGCCTGCAGACGCCTTGACCAAAGTTGGTCTCCAAAGGTGACCATGATAGCTTCATCAAGAACAAATCACACAAGATTTTTTCTTTTTAACTCTCCAGAAAACGTTCCTCCAGGAATTGTTGTTGACAACACAGTCTCTCACCCACATAACTACGATTTCTACATGTGCCCCCATTCAACGGTAAAAGGCACAACAAGACCAGTTCATTACCAAGTTTTATTGGATGAGATAGGCTTTCCAGTTGATGAACTGCAAGACCTTGTACATTCCTTGTCTTATGAATACCAGAGAGCCCATACTGCCATTTCTGAAGTGGCTCCTTTGCGATATGCTCGTTTGGTGGCTGCCCACATGTTAGAACTGATGGCTTTTCATGACACGACAAATGCATCGAACTATGGAGGTTCAACTTCTACGTGTGTTACTCTTCCTAAGTTGCATGACAACGTGCGCAATTCTATGTTCTTTTGTTGA 2502 0.3949 MEFTKVPPKEACTSLLVKRRVRIKLEPMPKRGNGSKGKRMSLLTNHFKVEISNLSGHFYCYNVQILHEDGYPVNKRAIKRRIIDGINGTYATELAGNHFAYDGNERLYTVGSLPQKKMEFFTVLDNVSAKRGEKNGNFVEGEDPERYSRKRLKHASKSRSYKVEISLANKIPIQAIANAQNLQESGNFDEALVVLNTILRHNAARKGFYSSFQVTQGGLSLNFGVSNTTIIQPGPVIDFVLSNQNVRHCHQIDWNKAKRTLKNLKIKVATSHIECRITGLSEKSCKQQRFFLNKKDDNHVTQITVYDYFVEHHNMVPNKSADLPCINVGNPKKPTYYPLELCSLLPLQRYTKQFSPQQRRSMIEKLSLKPHQMIKVIKDAMKSNKYNHDPLIHSCGISINKHFTQVEGRVLPAPRLRVGDGKELIPQNGRWSYSNKKLFEPAKIKHWAVVNFSSGLKISYLCEYLRKVGQMRGMAIDSPKTVLEENREFINAPPFVRVEKMFEQYTKFSSNEPDYFVLCLLPQRMNILKICEQTLANVILKINAKLGGLNSLLAIENIPIVSKVPTMIFGMSLSNSSPHRASIASVVASRQWPLISRYKASARIQQPSSKLIDTLFMPEPEGKDNGTVRCNYLFPKDRLACFEEFGLLKLDQDIVLTTEFQSNFNFRILCHFSPCQACRRLDQSWSPKVTMIASSRTNHTRFFLFNSPENVPPGIVVDNTVSHPHNYDFYMCPHSTVKGTTRPVHYQVLLDEIGFPVDELQDLVHSLSYEYQRAHTAISEVAPLRYARLVAAHMLELMAFHDTTNASNYGGSTSTCVTLPKLHDNVRNSMFFC 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02012 833 CDD PAZ_argonaute_like 233 345 - -
Bach1g02012 833 Pfam PAZ domain 237 362 IPR003100 GO:0005515
Bach1g02012 833 Gene3D - 410 526 - -
Bach1g02012 833 ProSiteProfiles PAZ domain profile. 276 346 IPR003100 GO:0005515
Bach1g02012 833 SMART Piwi_a_2 516 799 IPR003165 GO:0003676
Bach1g02012 833 ProSiteProfiles Piwi domain profile. 521 799 IPR003165 GO:0003676
Bach1g02012 833 Pfam Argonaute linker 2 domain 375 417 IPR032472 -
Bach1g02012 833 Gene3D paz domain 227 351 - -
Bach1g02012 833 Gene3D - 558 833 IPR036397 GO:0003676
Bach1g02012 833 Pfam N-terminal domain of argonaute 38 199 IPR032474 -
Bach1g02012 833 SUPERFAMILY Ribonuclease H-like 515 794 IPR012337 -
Bach1g02012 833 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 34 798 - -
Bach1g02012 833 Gene3D - 527 557 - -
Bach1g02012 833 Pfam Piwi domain 521 796 IPR003165 GO:0003676
Bach1g02012 833 Pfam Argonaute linker 1 domain 204 231 IPR014811 -
Bach1g02012 833 SUPERFAMILY PAZ domain 228 387 IPR036085 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02012 Bach-Chr1 32684984 32689631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02012 29 833 Eukaryotic Initiation Factors Gene Family AT5G43810 29.143 2.72e-96 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02012 K11593 - pop:7453743 810.446