Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02009 ATGGGGAGGAAGCGAAAATTGGAGCCTAAATCCGCCACCGAATCCGTCGAACCTCCGCTGAAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACAAATAGAAGCGCAGGTCGTACAGGAGGAGACCCAATTGGAGCTTGAAGGCCAAGAGATTGGGGCTGAGTACGAGGAAGTTGAAGAAGAAGTAGAAGAAGAGGTGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACCCGGAAGAAGATGGTGATATTGCCCAAAACGCCAATGATCAGACATCTAAGGCTCCGTTAATATCATCGGCTGCTACATCCACCGCAGACCAAGGTGGTAAAGATGGTGACGAAGATGATGAGCCGATACAGAAGCTTCTGGAACCGTTCAGCAAGGATCAAATTGTAGATCTTCTCTGCGAAGCAGCGGATAAACATCGCGATTTGGCAGATCGGATCCGTAAGGTAGCTGATGAGGATCCCGTTCACCGGAAAATCTTTGTTCATGGCCTTGGATGGGACACAAACGCCGAGACCCTCGTTAGCGTATTCAAGCAATACGGGGAAATTGAAGATTGTAAAGCTGTATGTGATAAGATTTCAGGGAAGTCAAAGGGTTACGGTTTCATCCTGTTTAGGACACGTCGTGGGGCTCGTAATGCGCTGAAGGAACCACAGAAGAAGATTGGGAACCGGATGACGGCCTGCCAGCTGGCATCAATTGGCCCGGTTCAACAGCCAACCGCTGCACAACCAGCCCCGGCACCGCACTCATCAGAGTATACCCTGAGGAAGATTTACGTGAGCAATGTTGGGGCGGATTTGGATCCTCAGAAGTTGCTCGTATTCTTTTCCAAGTATGGGGAGATAGAGGAGGGACCATTGGGGCTTGACAAGATGACTGGGAAACCCAAAGGTTTCTGCTTGTTTGTGTACAAGAACATTGAGAGTGCCAAAAAGGCATTGGAAGAACCACATAAGGAATTTGAGGGCCATGTTTTGCACTGTCAGAAAGCAATTGATGGTCCAAAACCAGGAAAGGGTCAACATCAGCAACACCAGAATCCTCACAGACCGCAATTCCAGAGGAATGAGAACCCTAGCTTTGCTGGCGGGGCTGCTACTGGACCGGGGCATTTAATGGCACCAGCGGGACCAGGAATTGCATTTAACCAGGGTGCAGCGGCTGCTCAGACACTGAATCCGGCTCTTGGGCAGGCATTGACAGCATTGCTTGCAAGTCAAGGTGCTGGATTGGGGCTGACTAATTTGTTAGGAACTCTAGGATCAGCTGCTGCGGTAAACCCAGGTGTTCCTGCTGCAGGGCATGGGGTACAGGGGGGATACGGTAACCAGCCAAGCCCTGGAGTTATTGGAGGGTACACAAACCAGGGTGGCTTGCAGGGGGCATATGCGAACCAGCAGGTGGGGCAAAGTGGATCTGGAAGAGGACAGCATGGTGTTGGGCAGTATGGTGGAGTTGCCCCTTACATGGGGCACTAG 1506 0.5106 MGRKRKLEPKSATESVEPPLKQQQQQQQQQQQIEAQVVQEETQLELEGQEIGAEYEEVEEEVEEEVEEEEEEEEEEEEEEDPEEDGDIAQNANDQTSKAPLISSAATSTADQGGKDGDEDDEPIQKLLEPFSKDQIVDLLCEAADKHRDLADRIRKVADEDPVHRKIFVHGLGWDTNAETLVSVFKQYGEIEDCKAVCDKISGKSKGYGFILFRTRRGARNALKEPQKKIGNRMTACQLASIGPVQQPTAAQPAPAPHSSEYTLRKIYVSNVGADLDPQKLLVFFSKYGEIEEGPLGLDKMTGKPKGFCLFVYKNIESAKKALEEPHKEFEGHVLHCQKAIDGPKPGKGQHQQHQNPHRPQFQRNENPSFAGGAATGPGHLMAPAGPGIAFNQGAAAAQTLNPALGQALTALLASQGAGLGLTNLLGTLGSAAAVNPGVPAAGHGVQGGYGNQPSPGVIGGYTNQGGLQGAYANQQVGQSGSGRGQHGVGQYGGVAPYMGH 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02009 501 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 265 341 IPR000504 GO:0003723
Bach1g02009 501 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 56 342 - -
Bach1g02009 501 MobiDBLite consensus disorder prediction 1 123 - -
Bach1g02009 501 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 165 242 IPR000504 GO:0003723
Bach1g02009 501 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 267 336 IPR000504 GO:0003723
Bach1g02009 501 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 167 233 IPR000504 GO:0003723
Bach1g02009 501 Coils Coil 21 81 - -
Bach1g02009 501 Gene3D - 156 243 IPR012677 -
Bach1g02009 501 SUPERFAMILY RNA-binding domain, RBD 157 247 IPR035979 GO:0003676
Bach1g02009 501 MobiDBLite consensus disorder prediction 16 43 - -
Bach1g02009 501 MobiDBLite consensus disorder prediction 339 381 - -
Bach1g02009 501 MobiDBLite consensus disorder prediction 349 370 - -
Bach1g02009 501 MobiDBLite consensus disorder prediction 50 88 - -
Bach1g02009 501 SUPERFAMILY RNA-binding domain, RBD 247 366 IPR035979 GO:0003676
Bach1g02009 501 SMART rrm1_1 166 238 IPR000504 GO:0003723
Bach1g02009 501 SMART rrm1_1 266 338 IPR000504 GO:0003723
Bach1g02009 501 Gene3D - 245 375 IPR012677 -
Bach1g02009 501 MobiDBLite consensus disorder prediction 89 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02009 Bach-Chr1 32672432 32673937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02009 265 382 C2H2 Transcription Factor Family AT2G19380 33.884 1.77e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02009 K12741 - qsa:O6P43_006267 595.89