Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01989 ATGGGGAGGCCTCCTTGCTGTGACAAAGTTGGCGTCAAGAAGGGTCCATGGACACCTGAGGAGGATATAATCCTTGTTTCTTACATCCAAGAACATGGCCCAGGAAATTGGAGATCAGTTCCTACCCACACTGGGTTGTTAAGGTGCAGCAAAAGTTGCAGGCTCAGATGGACTAACTACCTCAGACCAGGAATCAAGAGAGGCAACTTTACTCCCCATGAGGAAGGGATTATAATTCACCTGCAAGCTCTATTGGGTAACAAATGGGCAGCCATAGCTTCCTACCTTCCACAAAGAACAGATAATGATATAAAGAACTATTGGAACACCCATTTAAAGAAGAAGCTGAAGAAATTCCAAGCAGCTTTGGACCCCCAACTGGCATCAGACTCAACAACTACTAGTCAGCTTTTAAATAAGAGCTTTAATGAGAGAAGAGCTAATTTAGATATCAGCAGCAACCATGGCTCCTCCCTTAGGCTTAGTCAGTCTTCCTCCTCCACCACCACCACCACCACCACTACCTATGCCTCAAGCACTGAGAACATCTCAAGGCTCTTAGAAGGTTGGATGAGGTCTTCTCCAAAGGCAGATACCCTTAATCTCAAAGGCAGCCTCAAAGAGAAAGAGCTTCAAAACAATGACAACAATAAGCTAGTGAAGTCTGCATCAGTGCCTGCTTTTGGGTCTTTCCGAACCAAAGATGAGCAAGAAGGTGGAGATATAGTCTCTCATGAAGAGTTTGATTCCATTTTATCGTTTGAGAATCTAAATAATGCTGGTTGGGACAATTCTACTTGCGACTCCATGCCTGATGAAAAGAATGCTGAAGCTGCAAAGGGTGCTGATGATGAGAAGGCTCATGATAAAGCTGAGAGGAATAAGCAGAGATCTGAGAACGGTAATACTCCTCCATTGTCATTTCTTGAGAAGTGGCTCTTGGATGAGAGCGTTGGTCAAGTAGAGGAGATGATGGAGATGTCTCCTATGTTCTAA 996 0.4438 MGRPPCCDKVGVKKGPWTPEEDIILVSYIQEHGPGNWRSVPTHTGLLRCSKSCRLRWTNYLRPGIKRGNFTPHEEGIIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFQAALDPQLASDSTTTSQLLNKSFNERRANLDISSNHGSSLRLSQSSSSTTTTTTTTYASSTENISRLLEGWMRSSPKADTLNLKGSLKEKELQNNDNNKLVKSASVPAFGSFRTKDEQEGGDIVSHEEFDSILSFENLNNAGWDNSTCDSMPDEKNAEAAKGADDEKAHDKAERNKQRSENGNTPPLSFLEKWLLDESVGQVEEMMEMSPMF 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01989 331 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bach1g01989 331 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Bach1g01989 331 CDD SANT 69 112 IPR001005 -
Bach1g01989 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Bach1g01989 331 SMART sant 66 114 IPR001005 -
Bach1g01989 331 SMART sant 13 63 IPR001005 -
Bach1g01989 331 CDD SANT 16 61 IPR001005 -
Bach1g01989 331 Gene3D - 13 66 - -
Bach1g01989 331 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bach1g01989 331 FunFam MYB-related transcription factor 13 66 - -
Bach1g01989 331 MobiDBLite consensus disorder prediction 273 297 - -
Bach1g01989 331 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bach1g01989 331 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 224 - -
Bach1g01989 331 FunFam Transcription factor MYB60 68 137 - -
Bach1g01989 331 Gene3D - 69 144 - -
Bach1g01989 331 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bach1g01989 331 MobiDBLite consensus disorder prediction 153 178 - -
Bach1g01989 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Bach1g01989 331 MobiDBLite consensus disorder prediction 263 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01989 Bach-Chr1 32543311 32544708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01989 1 151 MYB Transcription Factor Family AT5G62470 77.707 2.12e-84 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach1g01989 Myb_DNA-binding 2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01989 K09422 - gmx:100817854 421.009