Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01982 TTCCTCTCCCCTTGTGGCATTGTGTTGGTAGTGGGATTTTTGAAAGCTCTAGTTTTTGGGTTTTCTCTCGGTTTCTATCTTGGTCTTTCTTTGTGTTTATCTGGCTTTTCAATCTCAATGAGTTCACAACTCGTCAATGATAATGGTAATGGTTTCGAAGTAAAAGTGAACCTTTTACCTCCTAATCATCTTGTGCCACCTCCTCAACCTCCTTTATCTAACGCTTTTGGGGTTATGGGTTGTGGTGGTCAAATAGAGTCTAACAAGTCTGAGATGGGTTTTCAGATTCTGAACCATTCATTTAATCCACAAGAGAGCTGGGGAAGCAAGATACCCAGCGATGAAGGTGATGGATACTTTGGAGCTGAGAAAAAGAGCTTGTCTTTGAAACTTGGTGTGGAAGCGGAAGCTAAGAGCTCTGCTAAGGGAAGAAATGGCCACACCAAGCTTTGTGCTAGAGGTCACTGGAGGCCAGCTGAAGACGCCAAACTCAAAGAGCTTGTAACTCAGTATGGCCCTCAAAACTGGAACTTGATCGCTGAACATCTTGAAGGAAGATCAGGAAAAAGTTGCAGATTGAGGTGGTTTAATCAGCTAGATCCTAGAATTAACAGAAGGGCTTTCTCTGAGGAAGAAGAGGAGAAGCTCTTAGCCGCTCATAAACTGTATGGCAACAAATGGGCAATGATTGCTAGGCTCTTCCCTGGGAGGACTGATAATGCAGTGAAGAACCACTGGCATGTGATCATGGCAAGAAAGCACAGAGAGCAATCAAGTGTTTATAGGAGGAGAAAGCCGAACAACAACATTGAAAACCTTCCAAAGGGTTTAAATTTGACTTTAAAAAACAATGCTGGCAGTGAATCAACCATGTCAAGTACCATAGATGAATCTAACTCAACCTGCACTAATCTCTCCCTGACTCCCTCTTCATCCAAACAGCCTCCCATGAATTTTCCTAGTCCGAGTACAGTGTTGGGGTCATCTGGAGAAAGAGTGGTGAAAGTGGGGGATATGGGTTTTGACAAGTTCTTCGTTGGTTGGAAGGAATCATCATGTGAGGCTGGACCCTTGCAGAAACCTGTGGGTTTGGACCAATCTGGTTATTCAGATTCCAACTCAGAAGTTTCAGTATCTGAGTCAGTTGCCACCAACAAGACCAATCTCTCAATCTCTGGGGAAAGTGAAAACGTGGGTGATAAGATTAACAACCTAGCATTCATTGATTTTCTTGGTGTAGGAGCTACCTAGAAAAATGGCTCCTAGACTTCACCGAAAGAAACAACAGTCAAAGGCAGAGGGAGGGAAGGGCACAAGAAATGGGAGAGAAGAGTGTTGTTTAATGTCAGGGCCACAGTTGGGTCTGTGTTTGATTCAGAGAAATGGGTCTGCAGTAGTAGGTCCTGTCTGCATTCGATTGTGTACAGTTTAGTTCCATAAAAGGAAAAAAGAAGCTTAAAGTAAAAGGTAAAA 1473 0.4331 MSSQLVNDNGNGFEVKVNLLPPNHLVPPPQPPLSNAFGVMGCGGQIESNKSEMGFQILNHSFNPQESWGSKIPSDEGDGYFGAEKKSLSLKLGVEAEAKSSAKGRNGHTKLCARGHWRPAEDAKLKELVTQYGPQNWNLIAEHLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEEKLLAAHKLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKHREQSSVYRRRKPNNNIENLPKGLNLTLKNNAGSESTMSSTIDESNSTCTNLSLTPSSSKQPPMNFPSPSTVLGSSGERVVKVGDMGFDKFFVGWKESSCEAGPLQKPVGLDQSGYSDSNSEVSVSESVATNKTNLSISGESENVGDKINNLAFIDFLGVGAT 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01982 377 CDD SANT 176 208 IPR001005 -
Bach1g01982 377 FunFam MYB transcription factor 114 165 - -
Bach1g01982 377 SMART sant 165 213 IPR001005 -
Bach1g01982 377 SMART sant 113 162 IPR001005 -
Bach1g01982 377 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 114 160 IPR017930 -
Bach1g01982 377 Pfam Myb-like DNA-binding domain 117 177 - -
Bach1g01982 377 ProSiteProfiles Myb-like domain profile. 161 211 IPR001005 -
Bach1g01982 377 PANTHER MYB PROTEIN-RELATED 114 260 - -
Bach1g01982 377 Gene3D - 114 165 - -
Bach1g01982 377 FunFam MYB transcription factor 167 236 - -
Bach1g01982 377 CDD SANT 117 158 IPR001005 -
Bach1g01982 377 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 161 215 IPR017930 -
Bach1g01982 377 ProSiteProfiles Myb-like domain profile. 114 160 IPR001005 -
Bach1g01982 377 SUPERFAMILY Homeodomain-like 114 207 IPR009057 -
Bach1g01982 377 Gene3D - 167 234 - -
Bach1g01982 377 MobiDBLite consensus disorder prediction 247 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01982 Bach-Chr1 32497487 32499274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01982 113 249 MYB Transcription Factor Family AT1G69560 73.469 1.17e-71 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach1g01982 Myb_DNA-bind_6 1.8e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01982 K09422 - qsa:O6P43_009928 427.557