Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bach1g01957 | ATGGACAGGCTCATAAGAGTAGACCCATCAAACATTGTCCCAATCAGAGTTGAAGCCGGGCAGAAATGCCATGGTTTAATCACCTTGCGTAATGTTATGTACACCATGCCTGTGGCCTTCAGGCTTCAGCCACTGATCAAGACCCGTTACACGGTGAAGCCTCAATCTGGGATTATATCCCCTTTAGCTACAGTAACTATAGACATCGTTTATCATCTCCCACAAGGGTCTAATCTTCCCCACTGCTTCCCTCGCTGCGATGACTCCTTCCTCTTGCACAGCGTAGTAGTCCCAGGTGCAGCCACTAAAGAGCCTTCATCGATGTTTGACTCCGTGCCCACCGACTGGTTCACCACGAAAAAGAAGCAAGTTTTCATTGATAGTGGCATCAAAATCATGTTCATGGGGTCAACAATTTTGGCTCAATTAATTGCAGATGGGTCTATGGATGAAATCAGAGAAGTCCTGGAACGTGGTGACCCATCGTGGAAAGCTGCAGATTCAATTGATCCACAGGGTCAAACCTTGCTGCACTTGGCTATTGCTCAAAGCAGACCTGATCTTGTTCAATTACTCCTTGAATTCGAGGCTGATATAGAGGCTCCAAGCCGTTCTGGGTCAACTCCACTTGAGGTTGCTTCTTCCTCAGGCGAAACCTTGATAGTTGAGCTTCTATTGGCTCATAAGGCCAGCACAGAACGATCAGAATCATCCAATTGGGGCCCAATTCACCTCGCAGCCAGAGCAGGACATGTAGAGGTTCTGAGGCTACTCTTACTCAAAGGCGCTGAAGTGGATGCTCTTACAAAAGATGGCAACACAGCCTTACACCTTGCTATTGAGGAGAATACAAGAGAATGCGCTAGGCTTCTATTAGCAAACGGTGCCAGAACCGACGTTCGAAACACCGGAGAAGGTGACACCCCTTTACACATAGCTGCAGCCATGGGCGAGGAGCACATGGTCAAGCTATTGCTGCAAAAGGGTGCCAATAAAGACGTGAGAAATGGGGCGGAGAAAACCGCATACGACGTCGCAGCAGATAACGGCCATAACCGTCTCTTCGATGCGCTTCGATTAGGAGACAATCTGTGCGCAGCGGCAAGAAAAGGGGAAATCAGAACTATTCAGAAGCTGCTCGAGAATGGAGCTGCTATTAATCGGAAAGACCAAAATGGGTGGACGGCACTGCACAGAGCTTCCTTCAAAGGGAGACTAGATGTGGTTCGAGCTCTGCTAGACAAAGGGGCCGATGTGGACGCCAAAGACGAAGATGGGTACACAGCGTTGCATTGTGCCGTGGAATCAGGAAACGCAGATGTGACAGAGCGTCTGGTGAAGAGGGGAGCAGATGTCGAAGCCAGAACCAGTAAGGGTGTTACACCGCTACAAATAGCAGAGGCGCTGCACTATGCCGGGATCACGAGGATACTCGTTAATGGTGGGGCTAGCAGGGAGAATTTGGGTCAGATTCCAGCTATGGCTACCATTCCACCTGGGAATAAGATAGAATCTGGGGGGATGAAGAAGAAGATATCTAGAAACAGAGGGCTTCGGACTAGCTTTGATCGAAAATCAGCGGCTTTGGCTGTGCTTTAG | 1599 | 0.4922 | MDRLIRVDPSNIVPIRVEAGQKCHGLITLRNVMYTMPVAFRLQPLIKTRYTVKPQSGIISPLATVTIDIVYHLPQGSNLPHCFPRCDDSFLLHSVVVPGAATKEPSSMFDSVPTDWFTTKKKQVFIDSGIKIMFMGSTILAQLIADGSMDEIREVLERGDPSWKAADSIDPQGQTLLHLAIAQSRPDLVQLLLEFEADIEAPSRSGSTPLEVASSSGETLIVELLLAHKASTERSESSNWGPIHLAARAGHVEVLRLLLLKGAEVDALTKDGNTALHLAIEENTRECARLLLANGARTDVRNTGEGDTPLHIAAAMGEEHMVKLLLQKGANKDVRNGAEKTAYDVAADNGHNRLFDALRLGDNLCAAARKGEIRTIQKLLENGAAINRKDQNGWTALHRASFKGRLDVVRALLDKGADVDAKDEDGYTALHCAVESGNADVTERLVKRGADVEARTSKGVTPLQIAEALHYAGITRILVNGGASRENLGQIPAMATIPPGNKIESGGMKKKISRNRGLRTSFDRKSAALAVL | 532 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bach1g01957 | 532 | ProSiteProfiles | Ankyrin repeat profile. | 238 | 270 | IPR002110 | GO:0005515 | |
| Bach1g01957 | 532 | ProSiteProfiles | Ankyrin repeat profile. | 172 | 204 | IPR002110 | GO:0005515 | |
| Bach1g01957 | 532 | ProSiteProfiles | Ankyrin repeat region circular profile. | 172 | 201 | - | - | |
| Bach1g01957 | 532 | ProSiteProfiles | Ankyrin repeat region circular profile. | 271 | 302 | - | - | |
| Bach1g01957 | 532 | PANTHER | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED | 140 | 354 | - | - | |
| Bach1g01957 | 532 | ProSiteProfiles | Ankyrin repeat region circular profile. | 205 | 231 | - | - | |
| Bach1g01957 | 532 | ProSiteProfiles | Ankyrin repeat profile. | 305 | 337 | IPR002110 | GO:0005515 | |
| Bach1g01957 | 532 | Gene3D | - | 310 | 359 | IPR036770 | - | |
| Bach1g01957 | 532 | ProSiteProfiles | Ankyrin repeat profile. | 425 | 457 | IPR002110 | GO:0005515 | |
| Bach1g01957 | 532 | ProSiteProfiles | Ankyrin repeat region circular profile. | 305 | 336 | - | - | |
| Bach1g01957 | 532 | SUPERFAMILY | PapD-like | 2 | 150 | IPR008962 | - | |
| Bach1g01957 | 532 | ProSiteProfiles | Ankyrin repeat region circular profile. | 392 | 424 | - | - | |
| Bach1g01957 | 532 | ProSiteProfiles | Major sperm protein (MSP) domain profile. | 4 | 135 | IPR000535 | - | |
| Bach1g01957 | 532 | ProSiteProfiles | Ankyrin repeat profile. | 271 | 303 | IPR002110 | GO:0005515 | |
| Bach1g01957 | 532 | SUPERFAMILY | Ankyrin repeat | 167 | 487 | IPR036770 | - | |
| Bach1g01957 | 532 | ProSiteProfiles | Ankyrin repeat profile. | 205 | 237 | IPR002110 | GO:0005515 | |
| Bach1g01957 | 532 | Gene3D | - | 360 | 497 | IPR036770 | - | |
| Bach1g01957 | 532 | ProSiteProfiles | Ankyrin repeat profile. | 392 | 424 | IPR002110 | GO:0005515 | |
| Bach1g01957 | 532 | ProSiteProfiles | Ankyrin repeat region circular profile. | 238 | 267 | - | - | |
| Bach1g01957 | 532 | SMART | ANK_2a | 392 | 421 | IPR002110 | GO:0005515 | |
| Bach1g01957 | 532 | SMART | ANK_2a | 238 | 267 | IPR002110 | GO:0005515 | |
| Bach1g01957 | 532 | SMART | ANK_2a | 425 | 454 | IPR002110 | GO:0005515 | |
| Bach1g01957 | 532 | SMART | ANK_2a | 172 | 201 | IPR002110 | GO:0005515 | |
| Bach1g01957 | 532 | SMART | ANK_2a | 458 | 487 | IPR002110 | GO:0005515 | |
| Bach1g01957 | 532 | SMART | ANK_2a | 205 | 234 | IPR002110 | GO:0005515 | |
| Bach1g01957 | 532 | SMART | ANK_2a | 271 | 300 | IPR002110 | GO:0005515 | |
| Bach1g01957 | 532 | SMART | ANK_2a | 305 | 334 | IPR002110 | GO:0005515 | |
| Bach1g01957 | 532 | SMART | ANK_2a | 349 | 388 | IPR002110 | GO:0005515 | |
| Bach1g01957 | 532 | Pfam | MSP (Major sperm protein) domain | 5 | 108 | IPR000535 | - | |
| Bach1g01957 | 532 | PRINTS | Ankyrin repeat signature | 408 | 422 | IPR002110 | GO:0005515 | |
| Bach1g01957 | 532 | PRINTS | Ankyrin repeat signature | 306 | 321 | IPR002110 | GO:0005515 | |
| Bach1g01957 | 532 | Gene3D | Immunoglobulins | 1 | 125 | IPR013783 | - | |
| Bach1g01957 | 532 | ProSiteProfiles | Ankyrin repeat region circular profile. | 425 | 455 | - | - | |
| Bach1g01957 | 532 | Pfam | Ankyrin repeats (3 copies) | 162 | 231 | IPR002110 | GO:0005515 | |
| Bach1g01957 | 532 | Pfam | Ankyrin repeats (3 copies) | 243 | 336 | IPR002110 | GO:0005515 | |
| Bach1g01957 | 532 | Pfam | Ankyrin repeats (3 copies) | 365 | 455 | IPR002110 | GO:0005515 | |
| Bach1g01957 | 532 | Gene3D | - | 136 | 309 | IPR036770 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bach1g01957 | Bach-Chr1 | 32270604 | 32272202 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bach1g01957 | 363 | 467 | Ion Channels | AT4G32500 | 32.381 | 7.99e-08 | 53.1 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bach1g01957 | - | - | qsa:O6P43_006204 | 836.639 |