Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01943 ATGGGCGATAGGCCCATTGTTGGGAGATATTTGTCCTGTCGCCCTAATATGCTCTCGATATTGAGACTTCAATTGACCACACCCAACCTACCCATAATAGGAATTGTGAATAAATACCCTAGCTTGCATAGAGAGCTTCAAATACACCCCCATATAGATCGACAAAGAAGGGACAAACGCAGAGAGAGATCGATGAGGACTCCATCATCAAGGAGCAAGACAACACCATGCTGTAGCAAGGTTGGGATAAAGAGAGGGCCATGGACGCCGGAGGAAGATGAGATTTTGGCCAATTTCGTCCAAAAGGAAGGCCAAGGACGGTGGCGTACGCTGCCCAAACGGGCTGGGCTACAGCGCTGCGGGAAGAGCTGCCGGCTGCGGTGGATGAATTATCTTCGCCCTTCTGTCAAGAGAGGTCATATTGGTCCTGATGAGGAAGATCTCATCCTTCGCCTTCATCGTTTACTCGGCAACAGATGGTCCTTGATAGCTGGAAGAATACCAGGAAGGACAGACAACGAAATAAAAAATTATTGGAATACCCATCTTAGCAAGAAGCTCATAAGCCAAGGCATAGACCCAAGGACCCACAAGCCCTTAATCATTAACGATAACATTCCCAAGGCCCAGAGAATGGACTATCATGATCCAAATACAGTATCAAATAATCTTCATCCGATCCCTCAATCAAGTAGTAGTACTCCTGTTGAACAAAGTTATAGCAACTACCAAACAGATGCTATTACTGCCGGGAATCTGCAGAATCATCAGAATATAACAGAAGGGAATAACAGGTACATTAGCTGCGACCATGTGATGGGGATGGAGCGAGTTGAAGTAAAGTATGACAAGAACATTGGTGCACAGGAAGATACTCTCTCTTATTTTCTGGATTCATTGATGAATGACATTAATGGAGTCGACAATCAGCAGCTGCATCTGCAGGCGGATAACGTTTTTGCTTTGACTTCTCCCGCGCAATCTTTCAACCCAGCCTTTTGGGAAACTGAAGTACTTGATCAGATGTCCAATGGATACTTTATGGGATGA 1050 0.4533 MGDRPIVGRYLSCRPNMLSILRLQLTTPNLPIIGIVNKYPSLHRELQIHPHIDRQRRDKRRERSMRTPSSRSKTTPCCSKVGIKRGPWTPEEDEILANFVQKEGQGRWRTLPKRAGLQRCGKSCRLRWMNYLRPSVKRGHIGPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLISQGIDPRTHKPLIINDNIPKAQRMDYHDPNTVSNNLHPIPQSSSSTPVEQSYSNYQTDAITAGNLQNHQNITEGNNRYISCDHVMGMERVEVKYDKNIGAQEDTLSYFLDSLMNDINGVDNQQLHLQADNVFALTSPAQSFNPAFWETEVLDQMSNGYFMG 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01943 349 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 133 187 IPR017930 -
Bach1g01943 349 ProSiteProfiles Myb-like domain profile. 133 183 IPR001005 -
Bach1g01943 349 MobiDBLite consensus disorder prediction 48 86 - -
Bach1g01943 349 SUPERFAMILY Homeodomain-like 82 179 IPR009057 -
Bach1g01943 349 Gene3D - 142 211 - -
Bach1g01943 349 Pfam Myb-like DNA-binding domain 142 183 IPR001005 -
Bach1g01943 349 Pfam Myb-like DNA-binding domain 85 132 IPR001005 -
Bach1g01943 349 FunFam transcription repressor MYB5-like 142 210 - -
Bach1g01943 349 SMART sant 84 134 IPR001005 -
Bach1g01943 349 SMART sant 137 185 IPR001005 -
Bach1g01943 349 MobiDBLite consensus disorder prediction 48 68 - -
Bach1g01943 349 FunFam Myb transcription factor 82 138 - -
Bach1g01943 349 Gene3D - 85 137 - -
Bach1g01943 349 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 80 132 IPR017930 -
Bach1g01943 349 CDD SANT 87 132 IPR001005 -
Bach1g01943 349 CDD SANT 143 183 IPR001005 -
Bach1g01943 349 ProSiteProfiles Myb-like domain profile. 80 132 IPR001005 -
Bach1g01943 349 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 75 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01943 Bach-Chr1 32171424 32173925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01943 66 305 MYB Transcription Factor Family AT3G13540 56.250 1.04e-83 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach1g01943 Myb_DNA-binding 1.8e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01943 K09422 - rvl:131315345 293.893