Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01920 ATGGAGAATGGTATGGAGAGTGGGCATTGGTGCAACACATGCTCTAAAATGGTGAATCCAATGATTGACGATGCAAATAAGTGTCCATTATGCGGGACAGAGTTTGTGGAGGAAATGAGCAGCATGAGAAACCAGAATGATGGCATTGATTTAAGATCAGCCTTTGTGTTCTCTGTTTATGCTCCTATCTTTCTTGGTTTGATGGGTGCTTTCAGCCCTTCTCTATCATCATCATCAAGCATTGCAACCCAAGAAGAATATAGCAGCAGTAACAGGGGTAGCATTAGCAATCCTTCAAGAGAAGAGGAGGTTGAACAAGAGCATCAACTTGTACTTGGAAGAAGGAGGAACACTTCAGCTTCCACGATTCCTTTATTTCGTCGTCTCCATGTTAGGATGGCGTCTGAATCTGAGAACACAGAAAGAGAAAGCAATAGGAATATGAATACCATTGCTTTAGATCCATTTAACGAAGAGGCCTTGATTCTACGGGGTCCTTCTGGCTTGAACCAAACACGGAGCTCTTTAGGGGACTTTCTGGTAGGACCTGGTTTTGATTTATTCTTACAGCATCTTGCGCAGAATGCTTCCAATACATATGTAAATGTAAACCCTCCAGCGCGCAAGGCAGCTATAGAAGCAATGCCTAGTGTGGCCATTGAGGAGCATTTGCATTGCACGGTGTGCTTAGAGGATCTTGAGATAGGGAATCAAGTTAAAGAAATGCCTTGTAAGCATAAATTTCACGGTGGTTGCATTCTCTCATGGCTAAGACTCCATAGTTCTTGCCCAGTTTGCAGGTTTCAGATGCCATCTGATGATTTTAAGAGCAGAAACCAACGCAATCAGTATAGTGATCTAGCCAGAGCTAGAGAAGAGAGAATGAGTTATGCAAGAAGAAATTGGCTTTCTATACTTCACCCATTTGATAATTTTCGTCCTTCCCCTTGA 951 0.4269 MENGMESGHWCNTCSKMVNPMIDDANKCPLCGTEFVEEMSSMRNQNDGIDLRSAFVFSVYAPIFLGLMGAFSPSLSSSSSIATQEEYSSSNRGSISNPSREEEVEQEHQLVLGRRRNTSASTIPLFRRLHVRMASESENTERESNRNMNTIALDPFNEEALILRGPSGLNQTRSSLGDFLVGPGFDLFLQHLAQNASNTYVNVNPPARKAAIEAMPSVAIEEHLHCTVCLEDLEIGNQVKEMPCKHKFHGGCILSWLRLHSSCPVCRFQMPSDDFKSRNQRNQYSDLARAREERMSYARRNWLSILHPFDNFRPSP 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01920 316 ProSiteProfiles Zinc finger RING-type profile. 226 267 IPR001841 -
Bach1g01920 316 MobiDBLite consensus disorder prediction 81 97 - -
Bach1g01920 316 SUPERFAMILY RING/U-box 215 272 - -
Bach1g01920 316 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 103 271 - -
Bach1g01920 316 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 193 273 IPR013083 -
Bach1g01920 316 Pfam zinc-ribbon 9 39 IPR039525 GO:0061630
Bach1g01920 316 MobiDBLite consensus disorder prediction 81 111 - -
Bach1g01920 316 FunFam E3 ubiquitin-protein ligase RNF181 195 273 - -
Bach1g01920 316 SMART ring_2 226 266 IPR001841 -
Bach1g01920 316 Pfam Ring finger domain 225 267 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01920 Bach-Chr1 32040906 32041856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01920 100 287 C3H Transcription Factor Family AT1G26800 34.555 4.65e-28 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01920 - K11982 gmx:100790855 341.273