Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01910 ATGAACGACCTTATGACCAAGTCCTTCACCAGTTATGTGGATCTGAAAAAAGCTGCCATGAAAGACATCGATTTGGAAGCTGGGCTTCCTCCAAAGGACTTAGAGCTGAGCTCTTCAACTACCCACATGGATACCAACATGGGTCTCTTCCTGGAAGAAGCCGAGAAGGTGAAAACAGAGATGGGTAATCTGCGTGAGATTCTGGAAAGGCTTCAACAAGCCAATGAAGAGAGTAAGTCCCTGCACAAGCCTGAAGCCCTGAAAACGTTAAGGAACAGGATCAATGCTGATATAGTCTCTGTTCAAAAGAAGGCTAGATCGATTCGATCTCAGCTTGAAGAAATGGACCGAGCCAATGCTGCTAACAGGAGACTCTCTGGACTCAAAGATGGCACACCTGCAATTTACAGGACCCGAATTGCGGTCACCAATGGACTGCGCAAGAAGCTCAAGGAGCTGATGATGGACTTCCAGGGACTTAGACAGAGGATGATGACAGAGTACAAAGAAACGGTGGGGAGACGCTATTTCACAGTGACCGGAGAAAACCCAAATGAAGAGGTGATCGAGAAGATCATCTCTGACGGAAGTGAGGAATTTCTGAGCAGGGCTATAAAAGAACACGGGAGGGGAAAGGTCCTGGAAACCGTGGTGGAGATTCAAGACAGGCACGATGCTGCTAAGGAGATTGAGAAGAGTCTGCTGGAGCTTCACCAGGTGTTTCTGGATATGGCAGTGATGGTGGAGGCACAGGGGGAGAAGATAGACGATATTGAGCACCATGTTCTCCATGCTTCACACTATGTCAAGGATGGAACTAAGGAACTGCAGAATGCAAAGAAATACCAAAAGAGCAGCAGAAAGTGGATGTGTATTGCTCTCATACTTCTCCTCGTTATCATTCTTGTAATTGTCATCCCAATTGCCACCAGTCTCACTAGTTCTTGA 948 0.4694 MNDLMTKSFTSYVDLKKAAMKDIDLEAGLPPKDLELSSSTTHMDTNMGLFLEEAEKVKTEMGNLREILERLQQANEESKSLHKPEALKTLRNRINADIVSVQKKARSIRSQLEEMDRANAANRRLSGLKDGTPAIYRTRIAVTNGLRKKLKELMMDFQGLRQRMMTEYKETVGRRYFTVTGENPNEEVIEKIISDGSEEFLSRAIKEHGRGKVLETVVEIQDRHDAAKEIEKSLLELHQVFLDMAVMVEAQGEKIDDIEHHVLHASHYVKDGTKELQNAKKYQKSSRKWMCIALILLLVIILVIVIPIATSLTSS 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01910 315 Pfam Syntaxin 50 252 IPR006011 GO:0016020
Bach1g01910 315 Gene3D - 213 312 - -
Bach1g01910 315 CDD SynN 47 204 IPR006011 GO:0016020
Bach1g01910 315 PANTHER SYNTAXIN 56 301 IPR045242 -
Bach1g01910 315 SUPERFAMILY t-snare proteins 45 272 IPR010989 GO:0016020|GO:0016192
Bach1g01910 315 Gene3D - 47 175 - -
Bach1g01910 315 SMART SynN_4 42 169 IPR006011 GO:0016020
Bach1g01910 315 Coils Coil 51 81 - -
Bach1g01910 315 SMART tSNARE_6 212 279 IPR000727 -
Bach1g01910 315 CDD SNARE_syntaxin1-like 216 277 - -
Bach1g01910 315 Pfam SNARE domain 253 305 IPR000727 -
Bach1g01910 315 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 217 279 IPR000727 -
Bach1g01910 315 ProSitePatterns Syntaxin / epimorphin family signature. 223 263 IPR006012 GO:0005484|GO:0006886|GO:0016020
Bach1g01910 315 FunFam Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group 44 175 - -
Bach1g01910 315 FunFam Syntaxin 132 210 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01910 Bach-Chr1 31981372 31982319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01910 1 315 SNARE and Associated Proteins AT1G08560 68.868 4.99e-143 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01910 K08486 - qsa:O6P43_006135 537.339