Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01879 ATGCCTCTTTCTTCTGATCATGCATCAGAGGAGAAAAAGCAAAATTTCATCTATTCTGTTTACCCATCACCATCTGAGGCCCAAAAGGAAACTCTATCACCCTCATCTCCCTCTTCATATCTTATCCGCACCAGCGATGCTAGCACCTTCCAAATCCCAGCCCCACATCGACAACCAACAACCTCTTCTAGCTTGATCGATAAGCAGGCCCCATCTCTTCCTGTTCATCAAGGCAATGTAAGAAAAAAACATTATAGGGGCGTGAGGCAGAGACCGTGGGGCAAATGGGCAGCCGAAATCCGGGACCCAAAAAAGGCGGCAAGAGTGTGGCTTGGAACTTTTGACACGGCAGAGGATGCTGCTGCTGCTTATGATGCTGCAGCACTCAAGTTCAAAGGGACCAAAGCCAAGCTAAATTTTCCCGAGCGCGTAGCTCTGGGACTAGACCCTTCAAACTATACTACTCCATTACCTAGTAATGTGCAATTTGCCAGCCCGGTAGCTCCTTCTCCGCTGTCTGCTGAGGCGGCGCCACTGGTTTCGCAAGTTTTACCGCCTCCTTTGCCAGACGTGGGGTTCCCGAACCTTCTGCAGTACGCGCAGCTGCTTCGCAGTGACGATGATTATGATTTTCAACGTGCTGCTTTTGGTCTTTATAGCTCCAACGAGCCAGCTGCTCTATCACCATTCTTCTCAACCTCGTCAAGTTCAATGCCTAAGTATGAGTACCAACACGATCAGGTTGAAGATACCCAGAAAGCACAGAAGGAAGAATATGGTTATTTTTTTAACGAAGGGAATTCTGACAGAAATGGATGA 819 0.4823 MPLSSDHASEEKKQNFIYSVYPSPSEAQKETLSPSSPSSYLIRTSDASTFQIPAPHRQPTTSSSLIDKQAPSLPVHQGNVRKKHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEDAAAAYDAAALKFKGTKAKLNFPERVALGLDPSNYTTPLPSNVQFASPVAPSPLSAEAAPLVSQVLPPPLPDVGFPNLLQYAQLLRSDDDYDFQRAAFGLYSSNEPAALSPFFSTSSSSMPKYEYQHDQVEDTQKAQKEEYGYFFNEGNSDRNG 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01879 272 ProSiteProfiles AP2/ERF domain profile. 84 141 IPR001471 GO:0003700|GO:0006355
Bach1g01879 272 PANTHER DNA-BINDING DOMAIN 39 234 IPR044808 GO:0003700|GO:0009873
Bach1g01879 272 MobiDBLite consensus disorder prediction 16 70 - -
Bach1g01879 272 SMART rav1_2 84 147 IPR001471 GO:0003700|GO:0006355
Bach1g01879 272 FunFam Ethylene-responsive transcription factor 2 83 142 - -
Bach1g01879 272 Gene3D AP2/ERF domain 83 143 IPR036955 GO:0003700|GO:0006355
Bach1g01879 272 CDD AP2 83 142 IPR001471 GO:0003700|GO:0006355
Bach1g01879 272 PRINTS Ethylene responsive element binding protein signature 85 96 IPR001471 GO:0003700|GO:0006355
Bach1g01879 272 PRINTS Ethylene responsive element binding protein signature 107 123 IPR001471 GO:0003700|GO:0006355
Bach1g01879 272 Pfam AP2 domain 84 133 IPR001471 GO:0003700|GO:0006355
Bach1g01879 272 SUPERFAMILY DNA-binding domain 84 142 IPR016177 GO:0003677
Bach1g01879 272 MobiDBLite consensus disorder prediction 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01879 Bach-Chr1 31756223 31757568 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01879 74 155 AP2-EREBP Transcription Factor Family AT5G61890 76.190 3.61e-41 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach1g01879 AP2 8.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01879 - - gsj:114398791 199.519