Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01873 ATGTCCATCTTGCCCTCACATACCCAAGGATCAAACTCGTCGTCTTCATCTACGCTATCTCCCAAACCTAATTCACAGCATGGAAACCTCCTCCACCCACCTCCTTCTCCTTCATCCCTCTCCTCGCTCTCCCACCAGCTCCAGGAATTTGGATCTCTCCGGATCTCCGATTTTCAATCTTCCGTCGCTGTGCCCGACGACAATCCAGGTCCATCGACTCCTACTCCAGAAGATTCTGGTGGACCTTCCGGAAAGGTGACAGAGTTTGGGTCTCCAAGTGGTATGGAAATTTTGCCTCACCAAAACTCTGGAACACATTCTAGGAGTCGCTCTAGCAGAAGGGCAGTTGGATCATCCCAGTCGAAAGCCAAGACTACAGGCTCATATGTTTCTCCAGGAAACCAACAGCATTCTGGGTCTGTCAGTTCTCACTTGAGCATCCCAAGTACTGGTCGAAAGTCTCAGATGGTAAATGGTAATCACTTGCTGAACTTTCAATATGATCCCATATCCCGTCCTCAGCCAAGGGGCCCTCCTCCTCCTCCCCCAAGAAGGCAGCGGAAGAGAAAACCTTACAACAAAGATTTGTTTCTTCAGGCAAATTACAAATTTATTGTGCTAGATTCAGGAAATTATTCGCCTGAGTTTATGGATCCAGATAAAATGTTACAGTGGGAAGATATTATATGTGTGAGGTATTCCACCCCATTGTTAGTTCAGTGTCCAATTTGTTTAGAGACTCCTCTATGCCCACAGATAACTTCATGTGGACATATTTTCTGTTTCCCATGTATCCTACAATACTTGTTAATGGGTGAGGAGGATCAGAAAGGAGATTGCTGGAAAAGGTGTCCCTTGTGCTTTGTTATGATATCTGCAAAGGATTTATATACCATCCAGGTTGAAAATGTCAAGCAGTACCATATTGGAGATAACATTGAGTTTACACTTCTAACTCGAAAAAAGGAATCCTTTAATCTGTCACATATAAACAAACAAGAGACAGATGTCATATCTTGTGACAGTGCTGGCCTGTCTGATCCATTTTCTAAGTTCATACTCACATCAGATGTGGATCTCTCAGTGAGGCAGGCAATATTAGATCTAGACAGTTGGCTGGCCAGAGCAGATTCAGGTCTTGTTGATGACCTGGAGAAGCTTCCGTATGTTTGTGCTGCAATGCAACAATTAGAACAGAGGAAAAAATATTGGAATGAGCACAGGGCTAGTGGCAATGATAAATCCTCTAGGTTTACTGATAGCAGATATCATGTACCATTGACAACTATTAATGGTACTGATGCTATTGATGATACCCATTCCAGTGCTTCAGGAACTTCATCTGCTGATTTTCATGACCAATGCAAGGGAGGGATATTGGATAAATCATATGCAGGTGCCTCTCCAGATCAAACTGTTGATGTGGAGAAAGTGTTAGTAGACCAAGACAGTAATTTATCCTCTTCCTATGAGGAGAAAAATGACATTCAAAGGCATTCAAATGACTGTAGAGATGTGAAGGACAGTGATTCGTACAATTTCTACCAGGCTGTTGATGGCCAGCATCTCATTCTTCATGCCCTAAACATGAAGTGTCTACTTCACCACTATGGGAGCTATGACATGCTTCCTCACAGAATAAGTGGAAAGATTCTGCAATTGGAGACAGTCACTCAATCAGAGGCCACAAGGAGGCGGTACCGATTCTTAAGTCATTTTCCTTTAACAACAACATTTCAGCTTTGTGAAATTGATTTGAGTGAGATATTACCTTCTGAAGCATTTGCCCCATTCATGGATGAAATAAAGAGGCGTGCTAACCAGAGAAAGCAACTTGCAAAGAAGGAACGCAAGGAGAAAATCAAGGCTGATGCTGCCTCTTCATACTCGCTTCCCATTACAACCAGTTATCAACTTACCACCCGTGATGACCCTCCCACATTCTCCATGGATGACTTTGAAGCTTTGGGAAATTCTACCGTGTCATCAAGTCCTCCAGTTGTTGGGGAGAGGTTATTGTTCTCAAATGTTACAAGGCTTGGTTTTGCTGCTGGTCACGGTTCTCCATCCTTGAAAACTCAAGAAGCTAGCAGTCTGCCCGGTGACAGTAGGACAACAGATTCTCCTGGCACAAGAGGCTTGCGAAATATGGAGACACCACCGTCATTTGTTAATGTTATATCCAGAGAAAAATCTATTAAAAGCTTGGATGCACCCAAGACTAGTAATGACTTGGGTAAGAAGGGGAAGAAGCCTAGTCGAGTTCTTCTGTCAACAGCTGGTGGTAGGCGTTATTGACCACTTCTCGCCGACTCTGTAATATGTTTAGTCATAAGTTTGCATCATCCTCCCATATCACTGTCCAATGGAGTTATCTCGTCATCATCCTTTTCATGGATGACATGTATT 2409 0.4338 MSILPSHTQGSNSSSSSTLSPKPNSQHGNLLHPPPSPSSLSSLSHQLQEFGSLRISDFQSSVAVPDDNPGPSTPTPEDSGGPSGKVTEFGSPSGMEILPHQNSGTHSRSRSSRRAVGSSQSKAKTTGSYVSPGNQQHSGSVSSHLSIPSTGRKSQMVNGNHLLNFQYDPISRPQPRGPPPPPPRRQRKRKPYNKDLFLQANYKFIVLDSGNYSPEFMDPDKMLQWEDIICVRYSTPLLVQCPICLETPLCPQITSCGHIFCFPCILQYLLMGEEDQKGDCWKRCPLCFVMISAKDLYTIQVENVKQYHIGDNIEFTLLTRKKESFNLSHINKQETDVISCDSAGLSDPFSKFILTSDVDLSVRQAILDLDSWLARADSGLVDDLEKLPYVCAAMQQLEQRKKYWNEHRASGNDKSSRFTDSRYHVPLTTINGTDAIDDTHSSASGTSSADFHDQCKGGILDKSYAGASPDQTVDVEKVLVDQDSNLSSSYEEKNDIQRHSNDCRDVKDSDSYNFYQAVDGQHLILHALNMKCLLHHYGSYDMLPHRISGKILQLETVTQSEATRRRYRFLSHFPLTTTFQLCEIDLSEILPSEAFAPFMDEIKRRANQRKQLAKKERKEKIKADAASSYSLPITTSYQLTTRDDPPTFSMDDFEALGNSTVSSSPPVVGERLLFSNVTRLGFAAGHGSPSLKTQEASSLPGDSRTTDSPGTRGLRNMETPPSFVNVISREKSIKSLDAPKTSNDLGKKGKKPSRVLLSTAGGRRY 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01873 765 ProSitePatterns Zinc finger RING-type signature. 256 265 IPR017907 -
Bach1g01873 765 ProSiteProfiles Zinc finger RING-type profile. 241 287 IPR001841 -
Bach1g01873 765 MobiDBLite consensus disorder prediction 1 192 - -
Bach1g01873 765 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 233 320 IPR013083 -
Bach1g01873 765 Pfam Zinc finger, C3HC4 type (RING finger) 241 287 IPR018957 GO:0046872
Bach1g01873 765 Coils Coil 599 623 - -
Bach1g01873 765 CDD RING-HC_RNF10 239 296 - -
Bach1g01873 765 SUPERFAMILY RING/U-box 240 294 - -
Bach1g01873 765 MobiDBLite consensus disorder prediction 733 751 - -
Bach1g01873 765 SMART ring_2 241 287 IPR001841 -
Bach1g01873 765 MobiDBLite consensus disorder prediction 684 765 - -
Bach1g01873 765 MobiDBLite consensus disorder prediction 1 68 - -
Bach1g01873 765 MobiDBLite consensus disorder prediction 96 167 - -
Bach1g01873 765 PANTHER RING FINGER 10 FAMILY MEMBER 86 765 IPR039739 -
Bach1g01873 765 MobiDBLite consensus disorder prediction 690 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01873 Bach-Chr1 31706350 31711814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01873 115 694 C3H Transcription Factor Family AT3G26730 56.951 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01873 K26979 - qsa:O6P43_006100 972.615