Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01868 ATGCTACCAAGAGCTCACGGCCTTCCTTGGATGGAAGGCGAAGTTGAAGATGCAGCATCTTGGACCAGAACTAACAACGACGCTGAGCCCAAGGACGTGGACATTGCCATGGGTGGTCCTCTAACTTCCTTCAAGTCAATGCTTGAAGGTGACTGGTACTTGAATACTGCTATTAACCCACCTCACCAGGACCTTCATAATCTCCCAAATCACCATGTAACCAGAGATATTGGCTTTTGCTCAAACCCAACTGATAATTTTCTCATACAGCCTGTCGATTCGTCGTCTTCCTGTACACCATCATTCAATCTCGACCCATCACAGTCACAGCCTTTTTATCCTCCTAAATCATGTTTCTCTTCTCTTATCAATGTCAGTAACAACAACCCTTTTGACAATGGCTTCGATTTGGGCTCTGAAACTGGGTTTCTCCCTCCATTCCAGGGGAATCAGAGTTCAAATTCACCTGGTTTGATGGGGTTCTCGGGGTTAAATACTCAACCTCAGATGGGTTCCCTCGAACTGAATTCAAGTTCCGAGTTCCCAGGTACTCGGATGCTGCCAGTAGCTGACAATGCCACCGCACTTGGTAGCGGATTTAGTCCAACGGCTTTAGAAGGTTTCGATAGTTCTGGAAGTGCTCTGTTTCTAAACAGCTCTAAGGTTTTAAGACCTCTTGACGTATTTCCGCAAGTGGGGTCGCAACCCACTCTTTTTCAGAAGCGAAAGGCGCTTCGCCAAAATTCTGGTGGAGCTGATAAGTTGGGAACTTTGGAGATTTCGGCATCGAGATTTGAGGATTCTTCAATGAGGTTGGAGAACATGGAGAGGAAGAGGAAGAAAACAGATGAGAGCGGAATCGAGGAATTGAGCATCGATGCTTCAGGGTTGAATTATGATTCCGATGAGGTTAATGAGTGTGGTAGGGTGGAGGAGAATGGAAATAATGTAGCAAGCGATTCTAATGTAAATAGCACTGTTACTGGTGGAGACCAGAAGGGGAAGAAAAAGGGGTTACCGGCGAAAAATCTCATGGCTGAGAGGCGGCGTAGGAAGAAGCTGAATGATAGGTTGTACATGCTTAGGTCGGTTGTGCCTAAAATTAGCAAGATGGACAGGGCTTCTATACTTGGCGATGCAATTGACTACTTGAAGGAGCTTCTGCAGCGGATTAATGATCTGCATAATGAGCTGGAGTCATCTCCTGGTTCATTGCTGCCATCTTCTACAAGCTTTCACCCTTTAACACCCACTCCAGCAACTCTTCCCAGCCGGGTCAAGGAAGAACTATGCCCTAGCTCCTTGGCAAGCCCAAAAAATCAATCTGCACGGGTGGAGGTTAGGATAAGGGAAGGGAGAGCTGTCAACATCCATATGTTTTGCGGCCGCAGACCAGGTCTTTTGTTGTCCACCATGAGGGCTCTGGATAACCTTGGATTGGATGTTCAGCAAGCCGTTATCAGTTGTTTCAATGGCTTCGCTTTAGATGTTTTCAGAGCTGAGCAATGCAGAGAAGGCCAGGATGTCCTCCCTGAGCAAATCAAAGCAGTGCTGTTGGATTCAGCGGGTTTCCGTGTATGA 1581 0.4693 MLPRAHGLPWMEGEVEDAASWTRTNNDAEPKDVDIAMGGPLTSFKSMLEGDWYLNTAINPPHQDLHNLPNHHVTRDIGFCSNPTDNFLIQPVDSSSSCTPSFNLDPSQSQPFYPPKSCFSSLINVSNNNPFDNGFDLGSETGFLPPFQGNQSSNSPGLMGFSGLNTQPQMGSLELNSSSEFPGTRMLPVADNATALGSGFSPTALEGFDSSGSALFLNSSKVLRPLDVFPQVGSQPTLFQKRKALRQNSGGADKLGTLEISASRFEDSSMRLENMERKRKKTDESGIEELSIDASGLNYDSDEVNECGRVEENGNNVASDSNVNSTVTGGDQKGKKKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESSPGSLLPSSTSFHPLTPTPATLPSRVKEELCPSSLASPKNQSARVEVRIREGRAVNIHMFCGRRPGLLLSTMRALDNLGLDVQQAVISCFNGFALDVFRAEQCREGQDVLPEQIKAVLLDSAGFRV 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01868 526 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 341 410 IPR036638 GO:0046983
Bach1g01868 526 CDD bHLH_AtAMS_like 341 399 - -
Bach1g01868 526 SMART finulus 344 393 IPR011598 GO:0046983
Bach1g01868 526 MobiDBLite consensus disorder prediction 148 179 - -
Bach1g01868 526 Pfam Helix-loop-helix DNA-binding domain 345 387 IPR011598 GO:0046983
Bach1g01868 526 CDD ACT_UUR-ACR-like 457 517 - -
Bach1g01868 526 MobiDBLite consensus disorder prediction 312 331 - -
Bach1g01868 526 MobiDBLite consensus disorder prediction 312 338 - -
Bach1g01868 526 FunFam BHLH transcription factor 334 402 - -
Bach1g01868 526 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 215 525 - -
Bach1g01868 526 Gene3D - 332 401 IPR036638 GO:0046983
Bach1g01868 526 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 338 387 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01868 Bach-Chr1 31682050 31685419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01868 20 501 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 56.680 9.16e-152 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach1g01868 HLH 2.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01868 - - pcin:129305251 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g01395 8 9559307 9563344 Bach1g01868 1 31682050 31685419 BWGD
Bach1g01868 1 31682050 31685419 Bach1g01868 1 31682050 31685419 ECH