Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01748 ATGGCTTCTCTTCCATTCTTGCTTCTTTTAGCTTTCTCTCTTTTCATACCCAACTTTGTTTCCTCCTCAGCAGTTCAAGACCCTGAACTAGTTGTACAAGACGTCCACAGGAGCATCAATGCCTCTAGAAGAAACTTGGGTTACTTATCTTGTGGAACTGGTAACCCCATTGATGACTGCTGGAGGTGTGACCCCAGCTGGGAGAGCAACCGGCAAAGGCTCGCCGATTGCGCCATTGGGTTCGGTAAGAATGCCATTGGAGGAAAAAATGGTCGAATCTACGTCGTGACTGACGCCGGCGACGACGACCCGGTCAACCCCAAGCCAGGGACTTTAAGATATGGTGTTATTCAAGATGAGCCATTATGGATTATCTTCAAAAGAGACATGGTCATTAATCTTCAGCAAGAGCTTGTGATGAACTCCTATAAGACCGTTGATGGGAGGGGTGCTAGTGTCCACATTGCTGGTGGTGGCTGCTTTACCATACATTATGTGTCTAACATCATCATCCATGGCATTCACATCCATGATTGTAAGTCAACGGGGAATGCTGATATCAGAGACTCTCCTCACCATAGCGGGTATTGGAGGAAATCAGACGGCGACGGCGTCTCCATCTTTGGTTCAAGGCATGTATGGGTTGACCACTGCTCATTGTCTAACTGCCAAGACGGACTCATTGATGCCATCCATGGATCCACAGCCATCACCATCTCTAACAACTATATGACTCATCATGATAAGGTCATGCTCTTGGGCCACAGTGACTCGTATACACAAGACAAGGATATGCAGGTCACCATAGCCTTCAATCATTTTGGAGAAGGACTCGTACAAAGAATGCCAAGGTGTAGACATGGTTACTTTCATGTGGTGAACAATGACTATACTCACTGGGAAATGTATGCCATTGGTGGTAGTGGTGATCCCACCATCAACAGTCAAGGGAATAGGTTTCTTGCACCAAATACCCGGTCTAGCAAGGAAGTAACAAAGCACGAGGACGCTCCAGAGAGCGAATGGATGCACTGGAACTGGAGGTCTGAGGGTGACCTGTTCTTGAATGGAGCTTTCTTCAGGCAATCTGGTGCTGAAGCCTCTTCCAGCTACGCTAGGGCATCCAGCCTCAGCGCAAGACCATCAAGTCTCGTGGGTTCAATGACTGTCACTGCCGGAGCACTCAACTGCAGAAGGGGCAACCGCTGCTGATCATAGCCCTAAGATGATCCTTTAATTTATATATTAGCTAAGAAAGTAACTGTGTGGAGAAGCAAAGAAGAAAGTAAAAAATGAGAAAATTAGTAACTATCTTTCATTTGCTTCCCAGCAGTTTACTACTTATCTATACTATAGCAGTTCATTTTTACCTAGCAACTTTACCTTAACGACTTAATTACAACCTCTGCCTTCAGCATTTCTCCACGATGTACTAAGAGTATCATATCCACAAATTTCTTGCTTGTGCAGTAAGTGTTGGGTTATATATGTCAAACTTTC 1500 0.454 MASLPFLLLLAFSLFIPNFVSSSAVQDPELVVQDVHRSINASRRNLGYLSCGTGNPIDDCWRCDPSWESNRQRLADCAIGFGKNAIGGKNGRIYVVTDAGDDDPVNPKPGTLRYGVIQDEPLWIIFKRDMVINLQQELVMNSYKTVDGRGASVHIAGGGCFTIHYVSNIIIHGIHIHDCKSTGNADIRDSPHHSGYWRKSDGDGVSIFGSRHVWVDHCSLSNCQDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKDMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSGDPTINSQGNRFLAPNTRSSKEVTKHEDAPESEWMHWNWRSEGDLFLNGAFFRQSGAEASSSYARASSLSARPSSLVGSMTVTAGALNCRRGNRC 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01748 403 PRINTS Pollen allergen Amb family signature 303 322 IPR018082 -
Bach1g01748 403 PRINTS Pollen allergen Amb family signature 374 397 IPR018082 -
Bach1g01748 403 PRINTS Pollen allergen Amb family signature 137 153 IPR018082 -
Bach1g01748 403 PRINTS Pollen allergen Amb family signature 77 94 IPR018082 -
Bach1g01748 403 PRINTS Pollen allergen Amb family signature 201 222 IPR018082 -
Bach1g01748 403 PRINTS Pollen allergen Amb family signature 345 369 IPR018082 -
Bach1g01748 403 PRINTS Pollen allergen Amb family signature 101 126 IPR018082 -
Bach1g01748 403 PRINTS Pollen allergen Amb family signature 281 300 IPR018082 -
Bach1g01748 403 SMART amb_all 129 326 IPR002022 -
Bach1g01748 403 FunFam Pectate lyase 54 396 - -
Bach1g01748 403 PANTHER PECTATE LYASE 18-RELATED 24 401 IPR045032 GO:0030570
Bach1g01748 403 SUPERFAMILY Pectin lyase-like 39 397 IPR011050 -
Bach1g01748 403 Pfam Pectate lyase 137 320 IPR002022 -
Bach1g01748 403 Gene3D - 54 396 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01748 Bach-Chr1 30849399 30851465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01748 4 403 Polysaccharide Lyase AT5G63180 75.495 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01748 K01728 - qsa:O6P43_008865 729.939