Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01730 ATGGCGAAATCGTTATCCTTAACCCACGTATGGTTCCTATCATCTCGTTCTAGAGGTATGGCCACTGTAAGAGTACTTCATCAATTTCTTGTACCTTCAAAGTTGACACCTTTGAGAAAAGCTAATTCCTCTGTATCTTCCTCCTTAAGAACATTCTCCACCACATCCACCCCTTACCCACTTCAATACGAGATGATTATCAACCGCCCAGCTAAGTCCGAGCCTGCCCAGACTCGCCGCCGGGCTCTTCGTCGCAGTGAGTTCAATTCAGACAACTTCCCTGAATCGGAGTCACCGGAAGAATCCATTTCAGAATTGGGATTAGATAGTTGGGTTGATCGAAAACTGGCTTCGGGGATGGAAACAGACCAACCCGGCTCCCCAAAATTGGAGATGGACAAGGCTAAGAGAAAGTATTACAATAAACGGAGGAAGAGGATGTATGGGTCAGACTCGGATGAAGAAAATCGGCGGCCTGAAGAGCAGTTCGTGGAACTAAAGCCTGAGGTGGTAGAGCTTCCTACATTGCATAAGAGAGAGGAGGAATTGTATTTCTATGATACGTTTGCTTATCCGTGGGAAAAGGACAAGCATTATAAGATGGTTTATCAGTTAGAGAAGAAGTATTTTCCGGATCAGTGTCTCGATAAAGCGTTTCTTGAACCGGGAGAATCAAATGCGGATGTGAAGACTAAGGTGAAGGCAAAGAAGAAAGTCAGAGGTGATAGAAAGGAGAAGAAGGATGAGGTTGGCGATGAGAGTGATGATAAGAAGTTGTTATTCTTTGAGGAGAAGGCAGTAGAAGAAAAAAGGAATAATAGAGAATCGGTTGAGGATGGTAGCAAAGATCTTATGGAAAAGAAGGTCGAGGGGTTCTTTAAGTCTTTGACGAAAGTTCCCAACAAGGATGCTGAAGCTGGTAATGGAGAGCCATATCTCGCTTCAAGGACTACTGGACTCCCTCCCAGATGGGACGGTCCTCATGGCACTGTGGTTTTGGTGAACAAACCCAAAGGTTGGACTTCATTCACAGTTTGTGGAAAGCTGCGTCGCTTGGTCAAAGTGAAAAAGGTAGGTCATGCTGGGACTCTTGATCCTATGGCTACTGGTTTATTGATTGTTTGTGTTGGTAAAGCAACAAAGCTGGTAGATAGATATCAAGGGATGATTAAGGGATATAGCGGGGTTTTCCGCCTGGGGGAGGCCACTTCAACATGGGATGCTGATTCACCGGTCATTCAGCGTGAGCCATGGGAACACATCAAAGACGAAGATATAAGGAGAACTGCTTCATCCTTTTGTGGGGAGATTTGGCAGGTTCCTCCAATGTTCTCTGCTATTAAAGTTGGAGGTGAAAAAATGTATGAGAAAGCAAGGAGAGGAGAAAGCATTGAACTTTCACCTAGACGAATTTCAATTTTCCAATTTGACATAGAGCGAAGCTTAGATGACAGGCAGAATTTGATTTTTAGAGTGACATGTTCTAAAGGGACATACATTCGATCACTGTGTGCTGATTTTGGGAAGGCTCTTGGCAGTTGTGCCCATTTAACTGCCCTCCGAAGAGACTCGATTGGGCAATATTCAGCAAATGATGCATGGGAGTTTCAAGAGCTGGAAGAAGCTATTTCCAAGAGTTATTTCTAACTGTAATTCTGACCTATTACTCCCTCCCATGAATGTGGAAGCCATGCAGAGTGGTTGGCAAACCTTTCTCAAGCTTTGGGTTCTTCGAGAGATTGTTTTTCCCCTTCTCCTGATATATCAAGTATAGAACCTTAAAACATGTTTTAGAACATTCATTGTAGAATTTTTTAATATTTAATCATTGGAAGCAAAGGTGATAAATGATTGTTTTAACTTAATCAGAGGTATT 1876 0.4312 MAKSLSLTHVWFLSSRSRGMATVRVLHQFLVPSKLTPLRKANSSVSSSLRTFSTTSTPYPLQYEMIINRPAKSEPAQTRRRALRRSEFNSDNFPESESPEESISELGLDSWVDRKLASGMETDQPGSPKLEMDKAKRKYYNKRRKRMYGSDSDEENRRPEEQFVELKPEVVELPTLHKREEELYFYDTFAYPWEKDKHYKMVYQLEKKYFPDQCLDKAFLEPGESNADVKTKVKAKKKVRGDRKEKKDEVGDESDDKKLLFFEEKAVEEKRNNRESVEDGSKDLMEKKVEGFFKSLTKVPNKDAEAGNGEPYLASRTTGLPPRWDGPHGTVVLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRRTASSFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFQFDIERSLDDRQNLIFRVTCSKGTYIRSLCADFGKALGSCAHLTALRRDSIGQYSANDAWEFQELEEAISKSYF 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01730 548 MobiDBLite consensus disorder prediction 230 251 - -
Bach1g01730 548 MobiDBLite consensus disorder prediction 301 321 - -
Bach1g01730 548 SUPERFAMILY Pseudouridine synthase 330 543 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Bach1g01730 548 CDD PseudoU_synth_EcTruB 331 542 IPR014780 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Bach1g01730 548 MobiDBLite consensus disorder prediction 74 91 - -
Bach1g01730 548 Coils Coil 267 287 - -
Bach1g01730 548 FunFam tRNA pseudouridine synthase B 325 547 - -
Bach1g01730 548 PANTHER TRNA-PSEUDOURIDINE SYNTHASE 208 546 IPR014780 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Bach1g01730 548 MobiDBLite consensus disorder prediction 145 161 - -
Bach1g01730 548 Hamap tRNA pseudouridine synthase B [truB]. 328 548 IPR014780 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Bach1g01730 548 NCBIfam tRNA pseudouridine(55) synthase TruB 330 539 IPR014780 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Bach1g01730 548 Gene3D Pseudouridine synthase 326 547 - -
Bach1g01730 548 Pfam TruB family pseudouridylate synthase (N terminal domain) 350 500 IPR002501 GO:0006396
Bach1g01730 548 Pfam tRNA pseudouridylate synthase B C-terminal domain 501 544 IPR032819 -
Bach1g01730 548 MobiDBLite consensus disorder prediction 141 161 - -
Bach1g01730 548 MobiDBLite consensus disorder prediction 68 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01730 Bach-Chr1 30689225 30695093 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01730 331 532 NAC Transcription Factor Family AT3G57150 33.168 6.54e-21 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01730 K03177 - qsa:O6P43_004707 818.92